Microbial Type Culture Collection & Gene Bank, Institute of Microbial Technology, Chandigarh, India.
National Institute of Oceanography, Visakhapatnam, Andhra Pradesh, India.
PLoS One. 2014 Jan 21;9(1):e85590. doi: 10.1371/journal.pone.0085590. eCollection 2014.
Grimontia indica strain AK16(T) sp. nov. is the type strain of G. indica sp. nov. a new species within the genus Grimontia. This strain, whose genome is described here, was isolated from seawater sample collected from southeast coast of Palk Bay, India. G. indica AK16(T) is a Gram-negative, facultative aerobic rod shaped bacterium. There are only two other strains in the genus Grimontia one of which, Grimontia hollisae CIP 101886(T), is a reported human pathogen isolated from human stool sample while the other, 'Grimontia marina IMCC5001(T)', was isolated from a seawater sample. As compared to the pathogenic strain Grimontia hollisae CIP 101886(T), the strain AK16(T) lacks some genes for pathogenesis like the accessory colonization factors AcfA and AcfD, which are required for the colonization of the bacterium in the host body. While it carries some pathogenesis genes like OmpU, which are related to pathogenesis of Vibrio strains. This suggests that the life cycle of AK16(T) may include some pathogenic interactions with marine animal(s), or it may be an opportunistic pathogen. Study of the Grimontia genus is important because of the severe pathogenic traits exhibited by a member of the genus with only three species reported in total. The study will provide some vital information which may be useful in future clinical studies on the genus.
印度产 Grimontia 菌株 AK16(T) 是印度产 Grimontia 新种的模式菌株,属于 Grimontia 属的一个新物种。该菌株是从印度 palk 湾东南海岸采集的海水样本中分离出来的,其基因组在本文中进行了描述。G. indica AK16(T) 是革兰氏阴性、兼性需氧的杆状细菌。Grimontia 属中只有另外两个菌株,其中一个是 Grimontia hollisae CIP 101886(T),它是从人类粪便样本中分离出来的报道的人类病原体,而另一个是“Grimontia marina IMCC5001(T)”,它是从海水样本中分离出来的。与致病性菌株 Grimontia hollisae CIP 101886(T)相比,菌株 AK16(T) 缺乏一些致病基因,如辅助定植因子 AcfA 和 AcfD,这些基因是细菌在宿主体内定植所必需的。虽然它携带一些与致病性 Vibrio 菌株相关的致病基因,如 OmpU。这表明 AK16(T) 的生命周期可能包括与海洋动物的一些致病性相互作用,或者它可能是一种机会性病原体。对 Grimontia 属的研究很重要,因为该属的一个成员表现出严重的致病特征,而总共只报告了三个物种。该研究将提供一些重要信息,这可能对未来关于该属的临床研究有用。