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隐匿奇异弧菌属新属、新种以及亚热带奇异弧菌新种,属于弧菌科,从日本石垣岛附近的珊瑚礁海水中分离得到。

Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae, isolated from coral reef seawater off Ishigaki Island, Japan.

作者信息

Amin A K M Rohul, Tanaka Mami, Al-Saari Nurhidayu, Feng Gao, Mino Sayaka, Ogura Yoshitoshi, Hayashi Tetsuya, Meirelles Pedro M, Thompson Fabiano L, Gomez-Gil Bruno, Sawabe Toko, Sawabe Tomoo

机构信息

Laboratory of Microbiology, Faculty of Fisheries, Hokkaido University, Hakodate, Japan.

Laboratory of Microbiology, Faculty of Fisheries, Hokkaido University, Hakodate, Japan; Institute of Bioscience (IBS), Universiti Putra Malaysia (UPM), Serdang, Malaysia.

出版信息

Syst Appl Microbiol. 2017 Jul;40(5):290-296. doi: 10.1016/j.syapm.2017.04.003. Epub 2017 Jun 16.

Abstract

Two phylogenetically distinct Vibrionaceae strains C4II189 and C4V358 isolated from reef seawater off Ishigaki Island, Japan, in 2014 were studied with advanced genome-based taxonomy approaches. All aspects of phylogenetic (16S rRNA phylogeny, MLSA), phenotypic and genetic (ANI, DDH, AAI, and the number of core genes) cohesions between the two identified species were high enough to propose them as members of a new genus within the family Vibrionaceae. Consequently, an eighth genus Thaumasiovibrio gen. nov. is proposed that contains two new species Thaumasiovibrio occultus sp. nov. strain C4II189 (=DSM 101554=JCM 31629) (type species) and Thaumasiovibrio subtropicus sp. nov. strain C4V358 (=DSM 101555=JCM 31630). Thaumasiovibrio species were phylogenetically distinct from the other Vibrionaceae species based on pyrH gene sequences. The combination of catalase negative, sensitivity to vibriostatic agent O/129, and green colony formation on TCBS for the phylogenetically affiliated strains was the diagnostic features for the current tentative identification of this genus.

摘要

2014年从日本石垣岛附近珊瑚礁海水中分离出的两种系统发育上不同的弧菌科菌株C4II189和C4V358,采用先进的基于基因组的分类学方法进行了研究。这两个已鉴定物种之间在系统发育(16S rRNA系统发育、多位点序列分析)、表型和遗传(平均核苷酸一致性、DNA-DNA杂交、平均氨基酸一致性以及核心基因数量)方面的所有凝聚性都足够高,足以将它们提议为弧菌科内一个新属的成员。因此,提出了第八个属——奇异弧菌属(Thaumasiovibrio gen. nov.),其中包含两个新物种,即隐匿奇异弧菌(Thaumasiovibrio occultus sp. nov.)菌株C4II189(=DSM 101554=JCM 31629)(模式种)和亚热带奇异弧菌(Thaumasiovibrio subtropicus sp. nov.)菌株C4V358(=DSM 101555=JCM 31630)。基于pyrH基因序列,奇异弧菌属物种在系统发育上与其他弧菌科物种不同。对于系统发育相关菌株,过氧化氢酶阴性、对弧菌抑制剂O/129敏感以及在硫代硫酸盐柠檬酸盐胆盐蔗糖琼脂(TCBS)上形成绿色菌落的组合是目前该属初步鉴定的诊断特征。

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