达喀尔梭菌新种的非连续完成基因组序列及描述
Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
作者信息
Lo Cheikh Ibrahima, Mishra Ajay Kumar, Padhmanabhan Roshan, Samb Bissoume, Sow Amy Gassama, Robert Catherine, Couderc Carine, Faye Ngor, Raoult Didier, Fournier Pierre-Edouard, Fenollar Florence
机构信息
Aix-Marseille Université, Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Marseille, France.
Unité de Bactériologie Expérimentale Institut Pasteur de Dakar 36, Dakar, Senegal.
出版信息
Stand Genomic Sci. 2013 Sep 30;9(1):14-27. doi: 10.4056/sigs.4097825. eCollection 2013 Oct 16.
Clostridium dakarense strain FF1(T), is the type strain of Clostridium dakarense sp. nov., a new species within the genus Clostridium. This strain, whose genome is described here, was isolated from the fecal flora of a 4-month-old Senegalese child suffering from gastroenteritis. C. dakarense sp. nov. strain FF1(T) is an obligate anaerobic Gram-positive bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,735,762 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 27.98% and contains 3,843 protein-coding and 73 RNA genes, including 8 rRNA genes.
达喀尔梭菌FF1(T)菌株是达喀尔梭菌新种的模式菌株，达喀尔梭菌是梭菌属内的一个新物种。这里描述了该菌株的基因组，它是从一名患有肠胃炎的4个月大塞内加尔儿童的粪便菌群中分离出来的。达喀尔梭菌新种FF1(T)菌株是一种专性厌氧革兰氏阳性杆菌。在此，我们描述了该生物体的特征以及完整的基因组序列和注释。该基因组长度为3,735,762 bp（1条染色体，无质粒），G+C含量为27.98%，包含3,843个蛋白质编码基因和73个RNA基因，其中包括8个rRNA基因。
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