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用于实验室进化的自动化培养系统的开发。

Development of an automated culture system for laboratory evolution.

作者信息

Horinouchi Takaaki, Minamoto Teruaki, Suzuki Shingo, Shimizu Hiroshi, Furusawa Chikara

机构信息

Quantitative Biology Center (QBiC), RIKEN, Osaka, Japan.

Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, Osaka, Japan.

出版信息

J Lab Autom. 2014 Oct;19(5):478-82. doi: 10.1177/2211068214521417. Epub 2014 Feb 13.

Abstract

Laboratory evolution provides phenotype-genotype mappings and quantitative analysis of selective pressures, giving important insights about evolutionary dynamics. Moreover, parallel laboratory evolution clarifies which phenotypic and genotypic changes are inevitable for adaptive evolution. Such parallel experiments, however, remain labor-intensive. In this study, to facilitate massive parallel laboratory evolution, we developed an automated culture system that can maintain hundreds of independent culture series in exponential growth phase under various culture conditions. We demonstrate the performance of this automated culture system using the laboratory evolution of Escherichia coli under various stressors.

摘要

实验室进化提供了表型-基因型映射以及对选择压力的定量分析,从而为进化动力学提供了重要见解。此外,平行实验室进化阐明了适应性进化中哪些表型和基因型变化是不可避免的。然而,这种平行实验仍然劳动强度大。在本研究中,为了促进大规模平行实验室进化,我们开发了一种自动化培养系统,该系统可以在各种培养条件下将数百个独立的培养系列维持在指数生长期。我们通过在各种应激源下对大肠杆菌进行实验室进化来展示这种自动化培养系统的性能。

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