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酵母病原体光滑念珠菌的基因组结构与动态变化

Genome structure and dynamics of the yeast pathogen Candida glabrata.

作者信息

Ahmad Khadija M, Kokošar Janez, Guo Xiaoxian, Gu Zhenglong, Ishchuk Olena P, Piškur Jure

机构信息

Department of Biology, Lund University, Lund, Sweden.

出版信息

FEMS Yeast Res. 2014 Jun;14(4):529-35. doi: 10.1111/1567-1364.12145. Epub 2014 Mar 10.

Abstract

The yeast pathogen Candida glabrata is the second most frequent cause of Candida infections. However, from the phylogenetic point of view, C. glabrata is much closer to Saccharomyces cerevisiae than to Candida albicans. Apparently, this yeast has relatively recently changed its life style and become a successful opportunistic pathogen. Recently, several C. glabrata sister species, among them clinical and environmental isolates, have had their genomes characterized. Also, hundreds of C. glabrata clinical isolates have been characterized for their genomes. These isolates display enormous genomic plasticity. The number and size of chromosomes vary drastically, as well as intra- and interchromosomal segmental duplications occur frequently. The observed genome alterations could affect phenotypic properties and thus help to adapt to the highly variable and harsh habitats this yeast finds in different human patients and their tissues. Further genome sequencing of pathogenic isolates will provide a valuable tool to understand the mechanisms behind genome dynamics and help to elucidate the genes contributing to the virulence potential.

摘要

酵母病原体光滑念珠菌是念珠菌感染的第二大常见病因。然而,从系统发育的角度来看,光滑念珠菌与酿酒酵母的亲缘关系比与白色念珠菌更近。显然,这种酵母相对较新地改变了其生活方式,并成为一种成功的机会致病菌。最近,几种光滑念珠菌的姐妹物种,包括临床分离株和环境分离株,已经对其基因组进行了表征。此外,数百株光滑念珠菌临床分离株也对其基因组进行了表征。这些分离株表现出巨大的基因组可塑性。染色体的数量和大小差异很大,并且染色体内和染色体间的片段重复频繁发生。观察到的基因组改变可能会影响表型特性,从而有助于适应这种酵母在不同人类患者及其组织中发现的高度可变和恶劣的栖息地。对致病性分离株进行进一步的基因组测序将提供一个有价值的工具,以了解基因组动态背后的机制,并有助于阐明有助于毒力潜力的基因。

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