Research Unit on Biomedical Informatics, Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Dr. Aiguader 88, Barcelona, Spain and Institució Catalana de Recerca i Estudis Avançats (ICREA), Passeig Lluís Companys, 23, Barcelona, Spain.
Research Unit on Biomedical Informatics, Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Dr. Aiguader 88, Barcelona, Spain and Institució Catalana de Recerca i Estudis Avançats (ICREA), Passeig Lluís Companys, 23, Barcelona, SpainResearch Unit on Biomedical Informatics, Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Dr. Aiguader 88, Barcelona, Spain and Institució Catalana de Recerca i Estudis Avançats (ICREA), Passeig Lluís Companys, 23, Barcelona, Spain.
Bioinformatics. 2014 Jun 15;30(12):1757-8. doi: 10.1093/bioinformatics/btu094. Epub 2014 Feb 23.
The generation of large volumes of omics data to conduct exploratory studies has become feasible and is now extensively used to gain new insights in life sciences. The effective exploration of the generated data by experts is a crucial step for the successful extraction of knowledge from these datasets. This requires availability of intuitive and interactive visualization tools that can display complex data. Matrix heatmaps are graphical representations frequently used for the description of complex omics data. Here, we present jHeatmap, a web-based tool that allows interactive matrix heatmap visualization and exploration. It is an adaptable javascript library designed to be embedded by means of basic coding skills into web portals to visualize data matrices as interactive and customizable heatmaps.
jHeatmap is freely available at the GitHub code repository at https://github.com/jheatmap/jheatmap. Working examples and the documentation may be found at http://jheatmap.github.io/jheatmap.
生成大量组学数据以进行探索性研究已经成为可能,目前广泛用于生命科学领域以获得新的见解。专家有效探索生成的数据是从这些数据集成功提取知识的关键步骤。这需要直观和交互式的可视化工具来显示复杂的数据。矩阵热图是用于描述复杂组学数据的常用图形表示。在这里,我们展示了 jHeatmap,这是一个基于网络的工具,允许交互式矩阵热图可视化和探索。它是一个可适应的 JavaScript 库,设计为通过基本编码技能嵌入到网络门户中,将数据矩阵可视化为交互式和可定制的热图。
jHeatmap 可在 GitHub 代码库 https://github.com/jheatmap/jheatmap 上免费获得。工作示例和文档可在 http://jheatmap.github.io/jheatmap 上找到。