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来自罗伊氏乳杆菌180的截短型和全长葡聚糖蔗糖酶GTF180酶的灵活性

Flexibility of truncated and full-length glucansucrase GTF180 enzymes from Lactobacillus reuteri 180.

作者信息

Pijning Tjaard, Vujičić-Žagar Andreja, Kralj Slavko, Dijkhuizen Lubbert, Dijkstra Bauke W

机构信息

Laboratory of Biophysical Chemistry, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, The Netherlands.

出版信息

FEBS J. 2014 May;281(9):2159-71. doi: 10.1111/febs.12769. Epub 2014 Mar 17.

Abstract

UNLABELLED

Glucansucrase enzymes synthesize high-molecular-mass extracellular α-glucan polysaccharides from sucrose. Previously, the crystal structure of truncated glucansucrase glucosyltransferase (GTF)180-ΔN from Lactobacillus reuteri 180 (lacking the N-terminal domain) revealed an elongated overall structure with two remote domains (IV and V) extending away from the core. By contrast, a new crystal form of the α-1,6/α-1,3 specific glucansucrase GTF180-ΔN shows an approximate 120(o) rotation of domain V about a hinge located between domains IV and V, giving a much more compact structure than before. Positional variability of domain V in solution is confirmed by small angle X-ray scattering experiments and rigid-body ensemble calculations. In addition, small angle X-ray scattering measurements of full-length GTF180 also provide the first structural data for a full-length glucansucrase, showing that the enzyme has an almost symmetric boomerang-like molecular shape, with a bend likely located between domains IV and V. The ~ 700-residue N-terminal domain, which is not present in the crystal structures, extends away from domain V and the catalytic core of the enzyme. We conclude that, as a result of the hinge region, in solution, GTF180-ΔN (and likely also the full-length GTF180) shows conformational flexibility; this may be a general feature of GH70 glucansucrases.

DATABASE

• Structural data for GTF180-ΔN II have been deposited in the Protein Data Bank under accession code 4AYG.

摘要

未标注

葡聚糖蔗糖酶可从蔗糖合成高分子量的细胞外α-葡聚糖多糖。此前,来自罗伊氏乳杆菌180的截短型葡聚糖蔗糖酶葡糖基转移酶(GTF)180-ΔN(缺少N端结构域)的晶体结构显示,其整体结构呈细长形,有两个远离核心的远端结构域(IV和V)。相比之下,α-1,6/α-1,3特异性葡聚糖蔗糖酶GTF180-ΔN的一种新晶体形式显示,结构域V围绕位于结构域IV和V之间的铰链旋转了约120°,形成了比之前紧凑得多的结构。小角X射线散射实验和刚体集合计算证实了结构域V在溶液中的位置变异性。此外,全长GTF180的小角X射线散射测量还提供了全长葡聚糖蔗糖酶的首个结构数据,表明该酶具有几乎对称的回飞棒状分子形状,弯曲可能位于结构域IV和V之间。晶体结构中不存在的约700个残基的N端结构域远离结构域V和酶的催化核心。我们得出结论,由于铰链区的存在,在溶液中,GTF180-ΔN(可能还有全长GTF180)表现出构象灵活性;这可能是GH70葡聚糖蔗糖酶的一个普遍特征。

数据库

• GTF180-ΔN II的结构数据已存入蛋白质数据库,登录号为4AYG。

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