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用于葡萄糖氧化酶定向进化的超高通量筛选方法。

Ultra-high-throughput screening method for the directed evolution of glucose oxidase.

作者信息

Ostafe Raluca, Prodanovic Radivoje, Nazor Jovana, Fischer Rainer

机构信息

Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Forckenbeckstrasse 6, 52074 Aachen, Germany; Institute of Molecular Biotechnology, RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany.

Institute of Molecular Biotechnology, RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany; Faculty of Chemistry, University of Belgrade, Studentski trg 12, 11000, Belgrade, Serbia.

出版信息

Chem Biol. 2014 Mar 20;21(3):414-21. doi: 10.1016/j.chembiol.2014.01.010. Epub 2014 Mar 6.

Abstract

Glucose oxidase (GOx) is used in many industrial processes that could benefit from improved versions of the enzyme. Some improvements like higher activity under physiological conditions and thermal stability could be useful for GOx applications in biosensors and biofuel cells. Directed evolution is one of the currently available methods to engineer improved GOx variants. Here, we describe an ultra-high-throughput screening system for sorting the best enzyme variants generated by directed evolution that incorporates several methodological refinements: flow cytometry, in vitro compartmentalization, yeast surface display, fluorescent labeling of the expressed enzyme, delivery of glucose substrate to the reaction mixture through the oil phase, and covalent labeling of the cells with fluorescein-tyramide. The method enables quantitative screening of gene libraries to identify clones with improved activity and it also allows cells to be selected based not only on the overall activity but also on the specific activity of the enzyme.

摘要

葡萄糖氧化酶(GOx)被用于许多工业过程,改进后的该酶版本可能会使这些过程受益。一些改进,如在生理条件下更高的活性和热稳定性,可能对GOx在生物传感器和生物燃料电池中的应用有用。定向进化是目前用于改造改良GOx变体的可用方法之一。在这里,我们描述了一种超高通量筛选系统,用于分选通过定向进化产生的最佳酶变体,该系统纳入了几种方法改进:流式细胞术、体外区室化、酵母表面展示、对表达的酶进行荧光标记、通过油相将葡萄糖底物递送至反应混合物以及用荧光素酪胺对细胞进行共价标记。该方法能够对基因文库进行定量筛选,以鉴定具有改进活性的克隆,并且还允许不仅基于酶的总活性而且基于比活性来选择细胞。

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