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嗜肝DNA病毒基因P产物中末端蛋白和核糖核酸酶H结构域的预测

Prediction of terminal protein and ribonuclease H domains in the gene P product of hepadnaviruses.

作者信息

Makhov A M

机构信息

D.I. Ivanovsky Institute of Virology, Academy of Medical Sciences, Moscow, USSR.

出版信息

FEBS Lett. 1989 Jan 30;243(2):115-8. doi: 10.1016/0014-5793(89)80110-3.

DOI:10.1016/0014-5793(89)80110-3
PMID:2465182
Abstract

By means of comparative analysis of primary and secondary structures, and hydropathy plots of hepadnavirus P proteins new functional domains were revealed additionally to the polymerase domain which had been found earlier in these proteins. The C-terminal part of P proteins was revealed to be significantly similar to ribonuclease H of E. coli. The ribonuclease H functional domain is known to be an integral entity of retrovirus reverse transcriptase as a rule. Availability of this domain indicates once more the putative reverse transcriptase properties of the P products. The proteins of hepadnaviruses were compared to terminal proteins of picornaviruses, adenoviruses and bacteriophages. The data obtained suggested that a conservative N-terminal region of P proteins functions as protein primer for DNA synthesis in hepadnaviruses.

摘要

通过对嗜肝DNA病毒P蛋白的一级和二级结构以及亲水性图谱进行比较分析,除了先前在这些蛋白中发现的聚合酶结构域外,还揭示了新的功能域。P蛋白的C末端部分被发现与大肠杆菌的核糖核酸酶H显著相似。众所周知,核糖核酸酶H功能域通常是逆转录病毒逆转录酶的一个组成部分。该结构域的存在再次表明P产物具有推定的逆转录酶特性。将嗜肝DNA病毒的蛋白与小RNA病毒、腺病毒和噬菌体的末端蛋白进行了比较。所得数据表明,P蛋白保守的N末端区域在嗜肝DNA病毒中作为DNA合成的蛋白质引物发挥作用。

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