• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

植物次生代谢物的基因聚类。

Gene clustering in plant specialized metabolism.

机构信息

Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.

Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.

出版信息

Curr Opin Biotechnol. 2014 Apr;26:91-9. doi: 10.1016/j.copbio.2013.10.009. Epub 2013 Nov 16.

DOI:10.1016/j.copbio.2013.10.009
PMID:24679264
Abstract

Physically linked clusters of genes that encode the enzymatic information for the synthesis of specialized metabolites are a well-established feature of microbial secondary metabolism. In contrast, the biosynthesis of plant specialized metabolites has until recently been thought to be almost exclusively encoded by genes that are randomly scattered in the genome. However, recent reports highlight the growing number of examples of gene clusters for specialized metabolic pathways in plants. Numerous gene clusters that encode for the biosynthesis of different classes of metabolite have now been discovered in a variety of plant species. Comparison of these characterized clusters now enables us to begin to define their salient features and to exploit plant biosynthetic gene clusters for synthetic biology applications.

摘要

在微生物次生代谢中,物理连接的基因簇是编码特殊代谢物合成的酶学信息的常见特征。相比之下,植物特殊代谢物的生物合成直到最近才被认为几乎完全由随机分散在基因组中的基因编码。然而,最近的报告强调了越来越多的植物特殊代谢途径的基因簇的例子。现在,在许多植物物种中发现了许多编码不同类别代谢物生物合成的基因簇。对这些已鉴定的基因簇进行比较,使我们能够开始定义它们的显著特征,并利用植物生物合成基因簇进行合成生物学应用。

相似文献

1
Gene clustering in plant specialized metabolism.植物次生代谢物的基因聚类。
Curr Opin Biotechnol. 2014 Apr;26:91-9. doi: 10.1016/j.copbio.2013.10.009. Epub 2013 Nov 16.
2
Genome-Wide Prediction of Metabolic Enzymes, Pathways, and Gene Clusters in Plants.植物中代谢酶、代谢途径和基因簇的全基因组预测
Plant Physiol. 2017 Apr;173(4):2041-2059. doi: 10.1104/pp.16.01942. Epub 2017 Feb 22.
3
Genomic Identification and Analysis of Specialized Metabolite Biosynthetic Gene Clusters in Plants Using PlantiSMASH.使用PlantiSMASH对植物中特殊代谢物生物合成基因簇进行基因组鉴定和分析
Methods Mol Biol. 2018;1795:173-188. doi: 10.1007/978-1-4939-7874-8_15.
4
The rise of operon-like gene clusters in plants.植物中操纵子样基因簇的兴起。
Trends Plant Sci. 2014 Jul;19(7):447-59. doi: 10.1016/j.tplants.2014.01.013. Epub 2014 Feb 27.
5
Chromatin Analysis of Metabolic Gene Clusters in Plants.植物代谢基因簇的染色质分析
Methods Mol Biol. 2020;2093:129-146. doi: 10.1007/978-1-0716-0179-2_10.
6
Making new molecules - evolution of pathways for novel metabolites in plants.制造新分子——植物中新代谢物途径的进化。
Curr Opin Plant Biol. 2012 Aug;15(4):415-23. doi: 10.1016/j.pbi.2012.05.005. Epub 2012 Jun 8.
7
Metabolic Gene Clusters in Eukaryotes.真核生物中的代谢基因簇。
Annu Rev Genet. 2018 Nov 23;52:159-183. doi: 10.1146/annurev-genet-120417-031237. Epub 2018 Sep 5.
8
From hormones to secondary metabolism: the emergence of metabolic gene clusters in plants.从激素到次生代谢:植物中代谢基因簇的出现。
Plant J. 2011 Apr;66(1):66-79. doi: 10.1111/j.1365-313X.2011.04503.x.
9
Beyond the Biosynthetic Gene Cluster Paradigm: Genome-Wide Coexpression Networks Connect Clustered and Unclustered Transcription Factors to Secondary Metabolic Pathways.超越生物合成基因簇范式:全基因组共表达网络将聚类和非聚类转录因子与次级代谢途径连接起来。
Microbiol Spectr. 2021 Oct 31;9(2):e0089821. doi: 10.1128/Spectrum.00898-21. Epub 2021 Sep 15.
10
Bioinformatics tools for the identification of gene clusters that biosynthesize specialized metabolites.生物信息学工具用于鉴定生物合成特殊代谢物的基因簇。
Brief Bioinform. 2018 Sep 28;19(5):1022-1034. doi: 10.1093/bib/bbx020.

引用本文的文献

1
Identification of the first plant caffeoyl-quinate esterases in .首次鉴定出植物中的咖啡酰奎宁酸酯酶 于……
Front Plant Sci. 2025 Aug 20;16:1632036. doi: 10.3389/fpls.2025.1632036. eCollection 2025.
2
GWAS identifies a molecular marker cluster associated with monoterpenoids in grapes.全基因组关联研究(GWAS)鉴定出与葡萄中单萜类化合物相关的分子标记簇。
Hortic Res. 2025 Jun 9;12(9):uhaf144. doi: 10.1093/hr/uhaf144. eCollection 2025 Sep.
3
Phylogenomics and metabolic engineering reveal a conserved gene cluster in Solanaceae plants for withanolide biosynthesis.
系统发育基因组学和代谢工程揭示了茄科植物中一个用于茄烷型内酯生物合成的保守基因簇。
Nat Commun. 2025 Jul 10;16(1):6367. doi: 10.1038/s41467-025-61686-1.
4
Application and Progress of Genomics in Deciphering the Genetic Regulation Mechanisms of Plant Secondary Metabolites.基因组学在解析植物次生代谢产物遗传调控机制中的应用与进展
Plants (Basel). 2025 Apr 26;14(9):1316. doi: 10.3390/plants14091316.
5
Comprehensive mutant chemotyping reveals embedding of a lineage-specific biosynthetic gene cluster in wider plant metabolism.全面的突变体化学分型揭示了一个谱系特异性生物合成基因簇嵌入更广泛的植物代谢中。
Proc Natl Acad Sci U S A. 2025 Mar 25;122(12):e2417588122. doi: 10.1073/pnas.2417588122. Epub 2025 Mar 19.
6
Deciphering Plant NLR Genomic Evolution: Synteny-Informed Classification Unveils Insights into TNL Gene Loss.解读植物NLR基因组进化:基于共线性的分类揭示TNL基因丢失的见解
Mol Biol Evol. 2025 Feb 3;42(2). doi: 10.1093/molbev/msaf015.
7
Post-genomic illumination of paclitaxel biosynthesis.紫杉醇生物合成的后基因组学阐释
Nat Plants. 2024 Dec;10(12):1875-1885. doi: 10.1038/s41477-024-01869-8. Epub 2024 Nov 27.
8
Understanding metabolic diversification in plants: branchpoints in the evolution of specialized metabolism.理解植物代谢多样化:特化代谢进化中的分支点。
Philos Trans R Soc Lond B Biol Sci. 2024 Nov 18;379(1914):20230359. doi: 10.1098/rstb.2023.0359. Epub 2024 Sep 30.
9
A developmental gradient reveals biosynthetic pathways to eukaryotic toxins in monocot geophytes.发育梯度揭示了单子叶植物地生植物中真核毒素的生物合成途径。
Cell. 2024 Oct 3;187(20):5620-5637.e10. doi: 10.1016/j.cell.2024.08.027. Epub 2024 Sep 13.
10
CLOCI: unveiling cryptic fungal gene clusters with generalized detection.CLOCI:利用广义检测揭示隐匿真菌基因簇。
Nucleic Acids Res. 2024 Sep 9;52(16):e75. doi: 10.1093/nar/gkae625.