Departamento de Genética, Universidad de Sevilla, Facultad de Biología, Apartado 1095, 41080 Sevilla, Spain.
Departamento de Genética, Universidad de Sevilla, Facultad de Biología, Apartado 1095, 41080 Sevilla, Spain
Nucleic Acids Res. 2014 May;42(9):5894-906. doi: 10.1093/nar/gku222. Epub 2014 Mar 20.
Long 3' untranslated regions (3'UTRs) are common in eukaryotic mRNAs. In contrast, long 3'UTRs are rare in bacteria, and have not been characterized in detail. We describe a 3'UTR of 310 nucleotides in hilD mRNA, a transcript that encodes a transcriptional activator of Salmonella enterica pathogenicity island 1 (SPI-1). Deletion of the hilD 3'UTR increases the hilD mRNA level, suggesting that the hilD 3'UTR may play a role in hilD mRNA turnover. Cloning of the hilD 3'UTR downstream of the green fluorescent protein (gfp) gene decreases green fluorescent protein (GFP) activity in both Escherichia coli and S. enterica, indicating that the hilD 3'UTR can act as an independent module. S. enterica mutants lacking either ribonuclease E or polynucleotide phosphorylase contain similar amounts of hilD and hilD Δ3'UTR mRNAs, suggesting that the hilD 3'UTR is a target for hilD mRNA degradation by the degradosome. The hilD 3'UTR is also necessary for modulation of hilD and SPI-1 expression by the RNA chaperone Hfq. Overexpression of SPI-1 in the absence of the hilD 3'UTR retards Salmonella growth and causes uncontrolled invasion of epithelial cells. Based on these observations, we propose that the S. enterica hilD 3'UTR is a cis-acting element that contributes to cellular homeostasis by promoting hilD mRNA turnover.
真核生物的 mRNA 普遍具有长的 3'非翻译区(3'UTR)。相比之下,细菌中的长 3'UTR 很少见,并且尚未详细表征。我们描述了 hilD mRNA 的 3'UTR 为 310 个核苷酸,该转录本编码沙门氏菌肠侵袭性致病岛 1(SPI-1)的转录激活因子。hilD 3'UTR 的缺失会增加 hilD mRNA 的水平,表明 hilD 3'UTR 可能在 hilD mRNA 周转中发挥作用。将 hilD 3'UTR 克隆到绿色荧光蛋白(GFP)基因的下游,会降低大肠杆菌和沙门氏菌中的绿色荧光蛋白(GFP)活性,表明 hilD 3'UTR 可以作为一个独立的模块发挥作用。缺乏核糖核酸酶 E 或多核苷酸磷酸化酶的沙门氏菌突变体含有相似数量的 hilD 和 hilD Δ3'UTR mRNA,表明 hilD 3'UTR 是 degradosome 降解 hilD mRNA 的靶标。hilD 3'UTR 对于 RNA 伴侣 Hfq 对 hilD 和 SPI-1 表达的调节也是必需的。在没有 hilD 3'UTR 的情况下过表达 SPI-1 会减缓沙门氏菌的生长并导致上皮细胞不受控制的入侵。基于这些观察结果,我们提出,沙门氏菌 hilD 3'UTR 是一种顺式作用元件,通过促进 hilD mRNA 周转来促进细胞内稳态。