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淡水细菌群落能转变为“类似海洋的”分类群吗?

Can the freshwater bacterial communities shift to the "marine-like" taxa?

作者信息

Zhang Lei, Gao Guang, Tang Xiangming, Shao Keqiang

机构信息

State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing, China; University of Chinese Academy of Sciences, Beijing, China.

出版信息

J Basic Microbiol. 2014 Nov;54(11):1264-72. doi: 10.1002/jobm.201300818. Epub 2014 Mar 31.

DOI:10.1002/jobm.201300818
PMID:24687773
Abstract

A mesocosm experiment was used to study the response of a freshwater bacterial community to increasing salinity. Bacterial community composition in the control and saline groups was analyzed using polymerase chain reaction (PCR)-terminal restriction fragment length polymorphism (T-RFLP) of the 16S rRNA genes, followed by clonal sequencing of eight selected samples. Cluster analysis and phylogenetic analysis revealed that the bacterial communities in pre- and post-salt addition samples were significantly different. Detailed analysis showed: (i) the existing bacterial taxa markedly declined from freshwater to hypersaline habitats, although some taxa maintain balanced growth over a small salinity range through inter-genus changes in community structures; (ii) the addition of salt induced a clear shift in the community structure toward a striking increase in the relative abundance of the latent "marine-like" genera (e.g., Alcanivorax and Roseovarius). The reasons may be that freshwater bacteria adapt to live in low salt concentrations and low osmotic pressure. They were not adapted to high concentrations of salt, and their acute response to increasing salinity resulted in significantly decreased numbers. However, as the salinity increases, rare members of the ever-present community (rare or dormant bacterial taxa in the "microbial seed bank") rise to the fore, while previous dominant members drop away. This study provides direct evidence for bacterial succession from halosensitive taxa in freshwater to halotolerant ones in response to water salinization.

摘要

通过中宇宙实验研究了淡水细菌群落对盐度增加的响应。使用聚合酶链反应(PCR)-16S rRNA基因的末端限制性片段长度多态性(T-RFLP)分析对照组和盐处理组的细菌群落组成,随后对八个选定样本进行克隆测序。聚类分析和系统发育分析表明,加盐前后样本中的细菌群落存在显著差异。详细分析显示:(i)从淡水到高盐生境,现有细菌类群显著减少,尽管一些类群通过群落结构的属间变化在较小盐度范围内保持平衡生长;(ii)加盐导致群落结构明显转变,潜在的“海洋类”属(如食烷菌属和玫瑰杆菌属)的相对丰度显著增加。原因可能是淡水细菌适应于生活在低盐浓度和低渗透压环境中。它们不适应高盐浓度,对盐度增加的急性反应导致数量显著减少。然而,随着盐度增加,现存群落中的稀有成员(“微生物种子库”中的稀有或休眠细菌类群)崭露头角,而先前的优势成员则逐渐减少。本研究为淡水环境中对盐敏感的细菌类群向耐盐细菌类群的演替提供了直接证据,以应对水体盐化。

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