Pagano Katiuscia, Tomaselli Simona, Zanzoni Serena, Assfalg Michael, Molinari Henriette, Ragona Laura
Istituto per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy.
Dipartimento di Biotecnologie, Università degli Studi di Verona, Strada Le Grazie 15, 37134, Verona, Italy.
Comput Struct Biotechnol J. 2013 Dec 8;6:e201303021. doi: 10.5936/csbj.201303021. eCollection 2013.
During the last decade a growing amount of evidence has been obtained, supporting the role of the beta-clamshell family of intracellular lipid binding proteins (iLBPs) not only in the translocation of lipophilic molecules but also in lipid mediated signalling and metabolism. Given the central role of lipids in physiological processes, it is essential to have detailed knowledge on their interactions with cognate binding proteins. Structural and dynamical aspects of the binding mechanisms have been widely investigated by means of NMR spectroscopy, docking and molecular dynamics simulation approaches. iLBPs share a stable beta-barrel fold, delimiting an internal cavity capable of promiscuous ligand binding and display significant flexibility at the putative ligand portal. These features make this class of proteins good scaffolds to build host-guest systems for applications in nanomedicine and nanomaterials.
在过去十年中,已获得越来越多的证据,支持细胞内脂质结合蛋白(iLBP)的β-蛤壳家族不仅在亲脂性分子的转运中发挥作用,而且在脂质介导的信号传导和代谢中也发挥作用。鉴于脂质在生理过程中的核心作用,详细了解它们与同源结合蛋白的相互作用至关重要。结合机制的结构和动力学方面已通过核磁共振光谱、对接和分子动力学模拟方法进行了广泛研究。iLBP具有稳定的β-桶状折叠结构,界定了一个能够杂乱地结合配体的内部腔室,并在假定的配体入口处表现出显著的灵活性。这些特性使这类蛋白质成为构建用于纳米医学和纳米材料应用的主客体系统的良好支架。