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丁酸梭菌(S)-3-羟基丁酰辅酶A脱氢酶的克隆、表达、纯化、结晶及X射线晶体学分析

Cloning, expression, purification, crystallization and X-ray crystallographic analysis of (S)-3-hydroxybutyryl-CoA dehydrogenase from Clostridium butyricum.

作者信息

Kim Eun-Jung, Kim Kyung-Jin

机构信息

School of Life Sciences, KNU Creative BioResearch Group (BK21 Plus Program), Kyungpook National University, Daehak-ro 80, Daegu 702-701, Republic of Korea.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Apr;70(Pt 4):485-8. doi: 10.1107/S2053230X14004348. Epub 2014 Mar 25.

DOI:10.1107/S2053230X14004348
PMID:24699745
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3976069/
Abstract

(S)-3-Hydroxybutyryl-CoA dehydrogenase from Clostridium butyricum (CbHBD) is an enzyme that catalyzes the second step in the biosynthesis of n-butanol from acetyl-CoA by the reduction of acetoacetyl-CoA to 3-hydroxybutyryl-CoA. The CbHBD protein was crystallized using the hanging-drop vapour-diffusion method in the presence of 2 M ammonium sulfate, 0.1 M CAPS pH 10.5, 0.2 M lithium sulfate at 295 K. X-ray diffraction data were collected to a maximum resolution of 2.3 Å on a synchrotron beamline. The crystal belonged to space group R3, with unit-cell parameters a = b = 148.5, c = 201.6 Å. With four molecules per asymmetric unit, the crystal volume per unit protein weight (VM) is 3.52 Å(3) Da(-1), which corresponds to a solvent content of approximately 65.04%. The structure was solved by the molecular-replacement method and refinement of the structure is in progress.

摘要

丁酸梭菌的(S)-3-羟基丁酰辅酶A脱氢酶(CbHBD)是一种通过将乙酰乙酰辅酶A还原为3-羟基丁酰辅酶A来催化从乙酰辅酶A生物合成正丁醇第二步反应的酶。CbHBD蛋白采用悬滴气相扩散法,在295 K下于含有2 M硫酸铵、0.1 M CAPS pH 10.5、0.2 M硫酸锂的条件下结晶。在同步加速器光束线上收集到最高分辨率为2.3 Å的X射线衍射数据。晶体属于R3空间群,晶胞参数a = b = 148.5,c = 201.6 Å。每个不对称单元中有四个分子,单位蛋白质重量的晶体体积(VM)为3.52 ų Da⁻¹,这对应于约65.04%的溶剂含量。该结构通过分子置换法解析,结构精修正在进行中。