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来自阿拉斯加鞘氨醇单胞菌的依克多因羟化酶的过表达、结晶及初步X射线晶体学分析。

Overexpression, crystallization and preliminary X-ray crystallographic analysis of the ectoine hydroxylase from Sphingopyxis alaskensis.

作者信息

Hoeppner Astrid, Widderich Nils, Bremer Erhard, Smits Sander H J

机构信息

Crystal Farm and X-ray Facility, Heinrich-Heine-Universität, Universitätsstrasse 1, 40225 Düsseldorf, Germany.

Department of Biology, Laboratory for Microbiology, Philipps-University Marburg, Marburg, Germany.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Apr;70(Pt 4):493-6. doi: 10.1107/S2053230X14004798. Epub 2014 Mar 25.

Abstract

The ectoine hydroxylase (EctD) is a member of the non-haem-containing iron(II)- and 2-oxoglutarate-dependent dioxygenase superfamily. Its mononuclear iron centre is a prerequisite for the activity of this enzyme and promotes the O2-dependent oxidative decarboxylation of 2-oxoglutarate, which is coupled to a two-electron oxidation of the substrate ectoine to yield 5-hydroxyectoine. An expression and purification protocol for the EctD enzyme from Sphingopyxis alaskensis was developed and the protein was crystallized using the sitting-drop vapour-diffusion method. This resulted in two different crystal forms, representing the apo and iron-bound forms of the enzyme.

摘要

ectoine羟化酶(EctD)是非含血红素的铁(II)和2-氧代戊二酸依赖性双加氧酶超家族的成员。其单核铁中心是该酶活性的先决条件,并促进2-氧代戊二酸的O2依赖性氧化脱羧,这与底物ectoine的双电子氧化偶联,生成5-羟基ectoine。开发了一种从阿拉斯加鞘氨醇单胞菌中表达和纯化EctD酶的方案,并使用坐滴气相扩散法使该蛋白质结晶。这产生了两种不同的晶体形式,分别代表该酶的脱辅基和铁结合形式。

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