Bursy Jan, Pierik Antonio J, Pica Nathalie, Bremer Erhard
Laboratory for Microbiology, Department of Biology, Philipps-University Marburg, D-35032 Marburg, Germany.
J Biol Chem. 2007 Oct 26;282(43):31147-55. doi: 10.1074/jbc.M704023200. Epub 2007 Jul 18.
By using natural abundance (13)C NMR spectroscopy, we investigated the types of compatible solutes synthesized in a variety of Bacilli under high salinity growth conditions. Glutamate, proline, and ectoine were the dominant compatible solutes synthesized by the various Bacillus species. The majority of the inspected Bacilli produced the tetrahydropyrimidine ectoine in response to high salinity stress, and a subset of these also synthesized a hydroxylation derivative of ectoine, 5-hydroxyectoine. In Salibacillus salexigens, a representative of the ectoine- and 5-hydroxyectoine-producing species, ectoine production was linearly correlated with the salinity of the growth medium and dependent on an ectABC biosynthetic operon. The formation of 5-hydroxyectoine was primarily a stationary growth phase phenomenon. The enzyme responsible for ectoine hydroxylation (EctD) was purified from S. salexigens to apparent homogeneity. The EctD protein was shown in vitro to directly hydroxylate ectoine in a reaction dependent on iron(II), molecular oxygen, and 2-oxoglutarate. We identified the structural gene (ectD) for the ectoine hydroxylase in S. salexigens. Northern blot analysis showed that the transcript levels of the ectABC and ectD genes increased as a function of salinity. Many EctD-related proteins can be found in data base searches in various Bacteria. Each of these bacterial species also contains an ectABC ectoine biosynthetic gene cluster, suggesting that 5-hydroxyectoine biosynthesis strictly depends on the prior synthesis of ectoine. Our data base searches and the biochemical characterization of the EctD protein from S. salexigens suggest that the EctD-related ectoine hydroxylases are members of a new subfamily within the non-heme-containing, iron(II)- and 2-oxoglutarate-dependent dioxygenase superfamily (EC 1.14.11).
通过使用天然丰度的(13)C核磁共振光谱,我们研究了多种芽孢杆菌在高盐度生长条件下合成的相容性溶质的类型。谷氨酸、脯氨酸和四氢嘧啶是各种芽孢杆菌合成的主要相容性溶质。大多数被检测的芽孢杆菌在高盐度胁迫下产生四氢嘧啶类物质四氢嘧啶,其中一部分还合成了四氢嘧啶的羟基化衍生物5-羟基四氢嘧啶。在产四氢嘧啶和5-羟基四氢嘧啶的盐芽孢杆菌中,四氢嘧啶的产生与生长培养基的盐度呈线性相关,并依赖于ectABC生物合成操纵子。5-羟基四氢嘧啶的形成主要是在稳定生长期出现的现象。负责四氢嘧啶羟基化的酶(EctD)从盐芽孢杆菌中纯化至表观均一性。EctD蛋白在体外被证明在依赖于亚铁离子、分子氧和2-氧代戊二酸的反应中直接将四氢嘧啶羟基化。我们鉴定了盐芽孢杆菌中四氢嘧啶羟化酶的结构基因(ectD)。Northern印迹分析表明,ectABC和ectD基因的转录水平随盐度的升高而增加。在各种细菌的数据库搜索中可以找到许多与EctD相关的蛋白质。这些细菌中的每一种还都含有一个ectABC四氢嘧啶生物合成基因簇,这表明5-羟基四氢嘧啶的生物合成严格依赖于四氢嘧啶的先合成。我们的数据库搜索以及来自盐芽孢杆菌的EctD蛋白的生化特性表明,与EctD相关的四氢嘧啶羟化酶是非含血红素、依赖亚铁离子和2-氧代戊二酸的双加氧酶超家族(EC 1.14.11)中的一个新亚家族成员。