Suppr超能文献

与Ca2+结合的转谷氨酰胺酶2的结晶及初步X射线晶体学研究。

Crystallization and preliminary X-ray crystallographic studies of transglutaminase 2 in complex with Ca2+.

作者信息

Jang Tae-Ho, Park Hyun Ho

机构信息

School of Biotechnology and Graduate School of Biochemistry, Yeungnam University, Gyeongsan, Republic of Korea.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Apr;70(Pt 4):513-6. doi: 10.1107/S2053230X1400510X. Epub 2014 Mar 25.

Abstract

Transglutaminase 2 (TG2) is a multi-functional protein that has been implicated in a variety of physiological cellular activities, including apoptosis, angiogenesis and cellular differentiation. Two functions of TG2 are protein cross-linking and GTP hydrolysis activities. The protein cross-linking activity of TG2 is positively controlled by calcium; however, the molecular mechanism of its Ca(2+)-dependent activity is completely unknown. In the present study, full-length human TG2 in complex with Ca(2+) was overexpressed, purified and crystallized at 20°C as a first step towards elucidating this mechanism. X-ray diffraction data were collected to a resolution of 3.4 Å from a crystal belonging to space group C2221, with unit-cell parameters a = 133.08, b = 216.30, c = 166.26 Å. Based on these data, the asymmetric unit was estimated to contain three molecules.

摘要

转谷氨酰胺酶2(TG2)是一种多功能蛋白质,参与多种生理细胞活动,包括细胞凋亡、血管生成和细胞分化。TG2的两种功能是蛋白质交联和GTP水解活性。TG2的蛋白质交联活性受钙正向调控;然而,其钙依赖性活性的分子机制完全未知。在本研究中,作为阐明该机制的第一步,与Ca(2+)结合的全长人TG2在20°C下进行了过表达、纯化和结晶。从属于空间群C2221的晶体收集了分辨率为3.4 Å的X射线衍射数据,晶胞参数a = 133.08,b = 216.30,c = 166.26 Å。基于这些数据,估计不对称单位包含三个分子。

相似文献

1
Crystallization and preliminary X-ray crystallographic studies of transglutaminase 2 in complex with Ca2+.
Acta Crystallogr F Struct Biol Commun. 2014 Apr;70(Pt 4):513-6. doi: 10.1107/S2053230X1400510X. Epub 2014 Mar 25.
2
Structure of natural variant transglutaminase 2 reveals molecular basis of gaining stability and higher activity.
PLoS One. 2018 Oct 15;13(10):e0204707. doi: 10.1371/journal.pone.0204707. eCollection 2018.
4
Structural aspects of transglutaminase 2: functional, structural, and regulatory diversity.
Apoptosis. 2017 Sep;22(9):1057-1068. doi: 10.1007/s10495-017-1396-9.
5
Crystal structure of transglutaminase 2 with GTP complex and amino acid sequence evidence of evolution of GTP binding site.
PLoS One. 2014 Sep 5;9(9):e107005. doi: 10.1371/journal.pone.0107005. eCollection 2014.
6
Mutation of a critical arginine in the GTP-binding site of transglutaminase 2 disinhibits intracellular cross-linking activity.
J Biol Chem. 2006 May 5;281(18):12603-9. doi: 10.1074/jbc.M600146200. Epub 2006 Mar 7.
7
Structural and mechanistic analysis of Ca-dependent regulation of transglutaminase 2 activity using a Ca-bound intermediate state.
Proc Natl Acad Sci U S A. 2024 Jul 9;121(28):e2407066121. doi: 10.1073/pnas.2407066121. Epub 2024 Jul 3.
8
External GTP-bound transglutaminase 2 is a molecular switch for chondrocyte hypertrophic differentiation and calcification.
J Biol Chem. 2005 Apr 15;280(15):15004-12. doi: 10.1074/jbc.M500962200. Epub 2005 Feb 3.
9
Functional significance of five noncanonical Ca2+-binding sites of human transglutaminase 2 characterized by site-directed mutagenesis.
FEBS J. 2009 Dec;276(23):7083-96. doi: 10.1111/j.1742-4658.2009.07420.x. Epub 2009 Oct 29.
10
Self-assembly of tissue transglutaminase into amyloid-like fibrils using physiological concentration of Ca2+.
Langmuir. 2011 Sep 6;27(17):10776-84. doi: 10.1021/la200740h. Epub 2011 Jul 26.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
REFMAC5 for the refinement of macromolecular crystal structures.
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18.
3
Crystal structure of human transglutaminase 2 in complex with adenosine triphosphate.
Int J Biol Macromol. 2010 Aug 1;47(2):190-5. doi: 10.1016/j.ijbiomac.2010.04.023. Epub 2010 May 5.
4
Characterization of transglutaminase type II role in dendritic cell differentiation and function.
J Leukoc Biol. 2010 Jul;88(1):181-8. doi: 10.1189/jlb.1009691. Epub 2010 Apr 6.
5
Opposing effects of two tissue transglutaminase protein isoforms in neuroblastoma cell differentiation.
J Biol Chem. 2010 Feb 5;285(6):3561-3567. doi: 10.1074/jbc.M109.053041. Epub 2009 Dec 10.
6
Phaser crystallographic software.
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
7
Transglutaminase 2 undergoes a large conformational change upon activation.
PLoS Biol. 2007 Dec;5(12):e327. doi: 10.1371/journal.pbio.0050327.
9
Mechanism of allosteric regulation of transglutaminase 2 by GTP.
Proc Natl Acad Sci U S A. 2006 Dec 26;103(52):19683-8. doi: 10.1073/pnas.0609283103. Epub 2006 Dec 18.
10
Matrix changes induced by transglutaminase 2 lead to inhibition of angiogenesis and tumor growth.
Cell Death Differ. 2006 Sep;13(9):1442-53. doi: 10.1038/sj.cdd.4401816. Epub 2005 Nov 18.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验