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纤毛原生动物中终止密码子的差异使用。

Differential use of termination codons in ciliated protozoa.

作者信息

Harper D S, Jahn C L

机构信息

Department of Biological Sciences, University of Illinois, Chicago 60680.

出版信息

Proc Natl Acad Sci U S A. 1989 May;86(9):3252-6. doi: 10.1073/pnas.86.9.3252.

DOI:10.1073/pnas.86.9.3252
PMID:2470096
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC287108/
Abstract

Sequence analysis of genes in four species of ciliated protozoa and analysis of tRNAs in Tetrahymena has demonstrated that TAG and TAA encode glutamine or glutamic acid in these organisms and TGA is the only stop codon. Thus, it has generally been assumed that all ciliates use a nonuniversal genetic code in which TGA acts as the sole termination codon. We have sequenced the linear DNA molecules that carry an actin gene and a beta-tubulin gene from the ciliate Euplotes crassus. These genes are shown to use TAA as a termination codon based on homology to known actin and beta-tubulin gene sequences. In addition, we have sequenced a portion of the 3' terminus of the E. crassus H4 histone gene and show that it also uses TAA as a termination codon. These data indicate that the timing of genetic code changes in the ciliates must be reconsidered.

摘要

对四种纤毛原生动物的基因进行序列分析以及对嗜热四膜虫的tRNA进行分析,结果表明在这些生物体中TAG和TAA编码谷氨酰胺或谷氨酸,而TGA是唯一的终止密码子。因此,人们普遍认为所有纤毛虫都使用一种非通用遗传密码,其中TGA作为唯一的终止密码子。我们已经对携带来自厚尾真核生物的肌动蛋白基因和β-微管蛋白基因的线性DNA分子进行了测序。基于与已知肌动蛋白和β-微管蛋白基因序列的同源性,这些基因显示使用TAA作为终止密码子。此外,我们对厚尾真核生物H4组蛋白基因3'末端的一部分进行了测序,并表明它也使用TAA作为终止密码子。这些数据表明,必须重新考虑纤毛虫中遗传密码变化的时间。

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Differential use of termination codons in ciliated protozoa.纤毛原生动物中终止密码子的差异使用。
Proc Natl Acad Sci U S A. 1989 May;86(9):3252-6. doi: 10.1073/pnas.86.9.3252.
2
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本文引用的文献

1
Isolation and characterization of the actin gene from Tetrahymena thermophila.从嗜热四膜虫中分离和鉴定肌动蛋白基因。
Proc Natl Acad Sci U S A. 1986 Jul;83(14):5160-4. doi: 10.1073/pnas.83.14.5160.
2
Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs.纤毛生物进化中的戏剧性事件:由于两种四膜虫 tRNA 的反密码子突变,UAA 和 UAG 终止密码子改变为谷氨酰胺密码子。
EMBO J. 1986 Jun;5(6):1307-11. doi: 10.1002/j.1460-2075.1986.tb04360.x.
3
Genome organization and reorganization in Tetrahymena.四膜虫的基因组组织与重组
Annu Rev Genet. 1980;14:203-39. doi: 10.1146/annurev.ge.14.120180.001223.
4
Phylogeny of protozoa deduced from 5S rRNA sequences.从5S核糖体RNA序列推导的原生动物系统发育
J Mol Evol. 1983;19(6):411-9. doi: 10.1007/BF02102316.
5
Codon usage and transfer RNA contents: organism-specific codon-choice patterns in reference to the isoacceptor contents.密码子使用与转运RNA含量:参照同功受体含量的物种特异性密码子选择模式。
Cold Spring Harb Symp Quant Biol. 1983;47 Pt 2:1087-97. doi: 10.1101/sqb.1983.047.01.123.
6
New M13 vectors for cloning.用于克隆的新型M13载体。
Methods Enzymol. 1983;101:20-78. doi: 10.1016/0076-6879(83)01005-8.
7
The nucleotide sequence of the rat cytoplasmic beta-actin gene.大鼠细胞质β-肌动蛋白基因的核苷酸序列。
Nucleic Acids Res. 1983 Mar 25;11(6):1759-71. doi: 10.1093/nar/11.6.1759.
8
A system for shotgun DNA sequencing.一种用于鸟枪法DNA测序的系统。
Nucleic Acids Res. 1981 Jan 24;9(2):309-21. doi: 10.1093/nar/9.2.309.
9
Blocking of in vitro translation of Paramecium messenger RNAs is due to messenger RNA primary structure.草履虫信使核糖核酸体外翻译的阻断是由于信使核糖核酸的一级结构。
Biochimie. 1984 May;66(5):403-12. doi: 10.1016/0300-9084(84)90024-5.
10
The two beta-tubulin genes of Chlamydomonas reinhardtii code for identical proteins.莱茵衣藻的两个β-微管蛋白基因编码相同的蛋白质。
Mol Cell Biol. 1984 Dec;4(12):2686-96. doi: 10.1128/mcb.4.12.2686-2696.1984.