Laboratory of Food Quality Design and Development, Division of Agronomy and Horticultural Science, Graduate School of Agriculture, Kyoto University, Japan.
FEBS J. 2014 Jun;281(11):2659-73. doi: 10.1111/febs.12812. Epub 2014 Apr 28.
Phenoloxidase (PO), which is classified as a type 3 copper protein, catalyzes the hydroxylation of monophenol to o-diphenol and subsequent oxidation to the corresponding o-quinone. The geometry and coordination environment of the active site of the arthropod PO are very similar to those of the arthropod hemocyanin (Hc). However, unlike the POs, Hc is an oxygen carrier in crustaceans, and does not possess PO activity in general. Recently, we identified a new type of proPO from a crustacean and designated it proPOβ. This enzyme has many characteristics that are rather similar to those of Hc, such as its maturation, localization, and oligomeric state. Here, we determined the crystal structure of proPOβ prepared from the hemolymph of kuruma prawns (Marsupenaeus japonicus) at 1.8-Å resolution. M. japonicus proPOβ forms a homohexamer rather similar to that of arthropod Hc. The geometry of the active copper site in proPOβ is nearly identical to that of arthropod Hc. Furthermore, the well-characterized 'place-holder' phenylalanine is present (Phe72). However, the accessibility to the active site differs in several ways. First, another phenylalanine, which shields the active site by interacting with a copper-coordinated histidine in crustacean Hc, is replaced by valine in the proPOβ structure. Second, two tyrosines, Tyr208 and Tyr209, both of which are absent in Hc, show the alternative conformations and form a pathway providing access to the reaction center. Thus, the present crystal structure clarifies the similarities and differences in the activity of two closely related proteins, PO and Hc.
Structural data are available in the RSCB protein data bank under the accession number 3WKY. ray crystallography (View interaction).
酚氧化酶(PO)被归类为 3 型铜蛋白,它催化单酚羟化为邻二酚,并随后氧化为相应的邻醌。节肢动物 PO 的活性部位的几何形状和配位环境与节肢动物血蓝蛋白(Hc)非常相似。然而,与 PO 不同的是,Hc 是甲壳类动物中的氧载体,一般不具有 PO 活性。最近,我们从一种甲壳动物中鉴定出一种新型的前酚氧化酶原,并将其命名为 proPOβ。这种酶具有许多与 Hc 非常相似的特性,例如其成熟度、定位和寡聚状态。在这里,我们确定了从日本对虾(Marsupenaeus japonicus)血淋巴中制备的 proPOβ的晶体结构,分辨率为 1.8Å。M. japonicus proPOβ形成类似于节肢动物 Hc 的同六聚体。proPOβ 中活性铜位点的几何形状与节肢动物 Hc 几乎相同。此外,存在特征明确的“占位”苯丙氨酸(Phe72)。然而,活性位点的可及性在几个方面有所不同。首先,另一个苯丙氨酸通过与甲壳动物 Hc 中铜配位的组氨酸相互作用来屏蔽活性位点,在 proPOβ 结构中被缬氨酸取代。其次,两个酪氨酸,Tyr208 和 Tyr209,在 Hc 中都不存在,它们呈现出替代构象,并形成一条通往反应中心的途径。因此,目前的晶体结构阐明了两种密切相关的蛋白质 PO 和 Hc 的活性的异同。
结构数据可在 RCSB 蛋白质数据库中以 3WKY 访问号获得。射线晶体学(查看相互作用)。