Haçarız Orçun, Baykal Ahmet Tarık, Akgün Mete, Kavak Pınar, Sağıroğlu Mahmut Şamil, Sayers Gearóid Patrick
TÜBİTAK Marmara Research Center, Genetic Engineering and Biotechnology Institute, Gebze, Kocaeli, Turkey.
Proteomics. 2014 Jun;14(12):1519-30. doi: 10.1002/pmic.201400012. Epub 2014 May 14.
Fasciola hepatica is a trematode helminth causing a damaging disease, fasciolosis, in ruminants and humans. Comprehensive proteomic studies broaden our knowledge of the parasite's protein profile, and provide new insights into the development of more effective strategies to deal with fasciolosis. The objective of this study was to generate a comprehensive profile of F. hepatica proteins expressed during the chronic stage of infection in cattle by building on previous efforts in this area. The approach included an improved sample preparation procedure for surface and internal layers of the parasite, the application of nano-UPLC-ESI-qTOF-MS (nano-ultra-performance LC and ESI quadrupole TOF MS) integrated with different acquisition methods and in silico database search against various protein databases and a transcript database including a new assembly of publically available EST. Of a total of 776 identified proteins, 206 and 332 were specific to the surface and internal layers of the parasite, respectively. Furthermore, 238 proteins were common to both layers, with comparative differences of 172 proteins detected. Specific proteins not previously identified in F. hepatica, but shown to be immunomodulatory or potential drug targets for other parasites, are discussed.
肝片吸虫是一种吸虫类蠕虫,可在反刍动物和人类中引发破坏性疾病——肝片吸虫病。全面的蛋白质组学研究拓宽了我们对该寄生虫蛋白质谱的认识,并为开发更有效的肝片吸虫病防治策略提供了新见解。本研究的目的是在前人该领域研究成果的基础上,生成牛感染慢性期肝片吸虫所表达蛋白质的全面图谱。该方法包括改进寄生虫表层和内层的样品制备程序,应用结合不同采集方法的纳米超高效液相色谱-电喷雾串联四极杆飞行时间质谱仪(nano-ultra-performance LC and ESI quadrupole TOF MS),并针对各种蛋白质数据库和转录本数据库(包括新组装的公开可用EST)进行计算机数据库搜索。在总共鉴定出的776种蛋白质中,分别有206种和332种是寄生虫表层和内层特有的。此外,有238种蛋白质在两层中都存在,检测到172种蛋白质存在比较差异。本文还讨论了在肝片吸虫中尚未鉴定出,但对其他寄生虫具有免疫调节作用或潜在药物靶点作用的特定蛋白质。