Department of Chemistry and Institute for Biophysical Dynamics, The University of Chicago, Chicago, Illinois, USA.
The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA.
J Bacteriol. 2014 Jul;196(14):2499-513. doi: 10.1128/JB.01538-14. Epub 2014 Apr 25.
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from human pathogens Staphylococcus aureus and Pseudomonas aeruginosa can be readily inhibited by reactive oxygen species (ROS)-mediated direct oxidation of their catalytic active cysteines. Because of the rapid degradation of H2O2 by bacterial catalase, only steady-state but not one-dose treatment with H2O2 rapidly induces glycolysis and the pentose phosphate pathway (PPP). We conducted transcriptome sequencing (RNA-seq) analyses to globally profile the bacterial transcriptomes in response to a steady level of H2O2, which revealed profound transcriptional changes, including the induced expression of glycolytic genes in both bacteria. Our results revealed that the inactivation of GAPDH by H2O2 induces metabolic levels of glycolysis and the PPP; the elevated levels of fructose 1,6-biphosphate (FBP) and 2-keto-3-deoxy-6-phosphogluconate (KDPG) lead to dissociation of their corresponding glycolytic repressors (GapR and HexR, respectively) from their cognate promoters, thus resulting in derepression of the glycolytic genes to overcome H2O2-stalled glycolysis in S. aureus and P. aeruginosa, respectively. Both GapR and HexR may directly sense oxidative stresses, such as menadione.
甘油醛-3-磷酸脱氢酶(GAPDH)来自人类病原体金黄色葡萄球菌和铜绿假单胞菌,可以通过其催化活性半胱氨酸的活性氧(ROS)介导的直接氧化轻易抑制。由于细菌过氧化氢酶对 H2O2 的快速降解,只有稳态而不是单次 H2O2 处理会迅速诱导糖酵解和戊糖磷酸途径(PPP)。我们进行了转录组测序(RNA-seq)分析,以全局描绘细菌对稳定水平的 H2O2 的转录组,揭示了深刻的转录变化,包括两种细菌中糖酵解基因的诱导表达。我们的结果表明,H2O2 对 GAPDH 的失活诱导了糖酵解和 PPP 的代谢水平;果糖 1,6-二磷酸(FBP)和 2-酮-3-脱氧-6-磷酸葡萄糖(KDPG)水平的升高导致其相应的糖酵解抑制剂(GapR 和 HexR)分别从其同源启动子解离,从而导致糖酵解基因的去抑制,以克服金黄色葡萄球菌和铜绿假单胞菌中 H2O2 停滞的糖酵解。GapR 和 HexR 都可能直接感知氧化应激,如亚甲蓝。