Balaguer-Ballester Emili, Tabas-Diaz Alejandro, Budka Marcin
Faculty of Science and Technology, Bournemouth University, United Kingdom; Bernstein Center for Computational Neuroscience, Medical Faculty Mannheim and Heidelberg University, Mannheim, Germany.
Faculty of Science and Technology, Bournemouth University, United Kingdom.
PLoS One. 2014 Apr 25;9(4):e95648. doi: 10.1371/journal.pone.0095648. eCollection 2014.
Identifying sources of the apparent variability in non-stationary scenarios is a fundamental problem in many biological data analysis settings. For instance, neurophysiological responses to the same task often vary from each repetition of the same experiment (trial) to the next. The origin and functional role of this observed variability is one of the fundamental questions in neuroscience. The nature of such trial-to-trial dynamics however remains largely elusive to current data analysis approaches. A range of strategies have been proposed in modalities such as electro-encephalography but gaining a fundamental insight into latent sources of trial-to-trial variability in neural recordings is still a major challenge. In this paper, we present a proof-of-concept study to the analysis of trial-to-trial variability dynamics founded on non-autonomous dynamical systems. At this initial stage, we evaluate the capacity of a simple statistic based on the behaviour of trajectories in classification settings, the trajectory coherence, in order to identify trial-to-trial dynamics. First, we derive the conditions leading to observable changes in datasets generated by a compact dynamical system (the Duffing equation). This canonical system plays the role of a ubiquitous model of non-stationary supervised classification problems. Second, we estimate the coherence of class-trajectories in empirically reconstructed space of system states. We show how this analysis can discern variations attributable to non-autonomous deterministic processes from stochastic fluctuations. The analyses are benchmarked using simulated and two different real datasets which have been shown to exhibit attractor dynamics. As an illustrative example, we focused on the analysis of the rat's frontal cortex ensemble dynamics during a decision-making task. Results suggest that, in line with recent hypotheses, rather than internal noise, it is the deterministic trend which most likely underlies the observed trial-to-trial variability. Thus, the empirical tool developed within this study potentially allows us to infer the source of variability in in-vivo neural recordings.
识别非平稳场景中明显变异性的来源是许多生物数据分析环境中的一个基本问题。例如,对同一任务的神经生理反应在同一实验(试验)的每次重复之间往往会有所不同。这种观察到的变异性的起源和功能作用是神经科学中的基本问题之一。然而,这种逐次试验动态的本质在很大程度上仍然难以被当前的数据分析方法所理解。在脑电图等模态中已经提出了一系列策略,但深入了解神经记录中逐次试验变异性的潜在来源仍然是一项重大挑战。在本文中,我们提出了一项基于非自治动力系统的逐次试验变异性动态分析的概念验证研究。在这个初始阶段,我们基于分类设置中轨迹的行为评估一种简单统计量——轨迹相干性的能力,以识别逐次试验动态。首先,我们推导导致由紧致动力系统(杜芬方程)生成的数据集中出现可观测变化的条件。这个典型系统在非平稳监督分类问题的普遍模型中发挥作用。其次,我们估计在经验重建的系统状态空间中类轨迹的相干性。我们展示了这种分析如何能够区分非自治确定性过程引起的变化和随机波动。使用模拟数据集和两个已被证明表现出吸引子动态的不同真实数据集对这些分析进行了基准测试。作为一个说明性示例,我们专注于对大鼠在决策任务期间额叶皮层整体动态的分析。结果表明,与最近的假设一致,最有可能是确定性趋势而非内部噪声构成了观察到的逐次试验变异性的基础。因此,本研究中开发的经验工具可能使我们能够推断体内神经记录中变异性的来源。