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类非核糖体肽合成酶蛋白腺苷化结构域的表征与工程改造:一种潜在的醛生成生物催化剂

Characterization and Engineering of the Adenylation Domain of a NRPS-Like Protein: A Potential Biocatalyst for Aldehyde Generation.

作者信息

Wang Meng, Zhao Huimin

机构信息

Department of Chemical and Biomolecular Engineering, Institute for Genomic Biology, Departments of Chemistry, Biochemistry, and Bioengineering, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.

出版信息

ACS Catal. 2014 Apr 4;4(4):1219-1225. doi: 10.1021/cs500039v. Epub 2014 Mar 17.

Abstract

The adenylation (A) domain acts as the first "gate-keeper" to ensure the activation and thioesterification of the correct monomer to nonribosomal peptide synthetases (NRPSs). Our understanding of the specificity-conferring code and our ability to engineer A domains are critical for increasing the chemical diversity of nonribosomal peptides (NRPs). We recently discovered a novel NRPS-like protein (ATEG_03630) that can activate 5-methyl orsellinic acid (5-MOA) and reduce it to 2,4-dihydroxy-5,6-dimethyl benzaldehyde. A NRPS-like protein is much smaller than multidomain NRPSs, but it still represents the thioesterification half-reaction, which is otherwise missed from a stand-alone A domain. Therefore, a NRPS-like protein may serve as a better model system for A domain engineering. Here, we characterize the substrate specificity of ATEG_03630 and conclude that the hydrogen-bond donor at the 4-position is crucial for substrate recognition. Next, we show that the substrate specificity of ATEG_03630 can be engineered toward our target substrate anthranilate via bioinformatics analysis and mutagenesis. The resultant mutant H358A increased its activity toward anthranilate by 10.9-fold, which led to a 26-fold improvement in specificity. Finally, we demonstrate one-pot chemoenzymatic synthesis of 4-hydroxybenzaldoxime from 4-hydroxybenzoic acid with high yield.

摘要

腺苷化(A)结构域作为首个“守门人”,以确保正确的单体被激活并硫酯化为非核糖体肽合成酶(NRPSs)。我们对赋予特异性的编码的理解以及对A结构域进行工程改造的能力,对于增加非核糖体肽(NRPs)的化学多样性至关重要。我们最近发现了一种新型的类NRPS蛋白(ATEG_03630),它能够激活5-甲基苔色酸(5-MOA)并将其还原为2,4-二羟基-5,6-二甲基苯甲醛。类NRPS蛋白比多结构域NRPS要小得多,但它仍然代表硫酯化半反应,而这在单独的A结构域中是缺失的。因此,类NRPS蛋白可能是A结构域工程改造的更好模型系统。在此,我们表征了ATEG_03630的底物特异性,并得出结论:4位的氢键供体对于底物识别至关重要。接下来,我们表明通过生物信息学分析和诱变,可以将ATEG_03630的底物特异性改造为针对我们的目标底物邻氨基苯甲酸。所得突变体H358A对邻氨基苯甲酸的活性提高了10.9倍,特异性提高了26倍。最后,我们展示了以高产率从4-羟基苯甲酸一锅法化学酶促合成4-羟基苯甲醛肟。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7cfe/3985451/af21522545b1/cs-2014-00039v_0001.jpg

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