The ithree institute and ‡Proteomics Core Facility, University of Technology Sydney , P.O. Box 123, Broadway, Sydney, NSW 2007, Australia.
J Proteome Res. 2014 Jun 6;13(6):2920-30. doi: 10.1021/pr500087c. Epub 2014 May 16.
MHJ_0493 (P216) is a highly expressed cilium adhesin in Mycoplasma hyopneumoniae. P216 undergoes cleavage at position 1074 in the S/T-X-F↓-X-D/E-like motif (1072)T-N-F↓Q-E(1076) generating N-terminal and C-terminal fragments of 120 kDa (P120) and 85 kDa (P85) on the surface of M. hyopneumoniae. Here we show that several S/T-X-F↓X-D/E-like motifs exist in P216 but only (1072)T-N-F↓Q-E(1076) and (1344)I-T-F↓A-D-Y(1349) were determined to be bona fide processing sites by identifying semitryptic peptides consistent with cleavage at the phenylalanine residue. The location of S/T-X-F↓-X-D/E-like motifs within or abutting regions of protein disorder greater than 40 consecutive amino acids is consistent with our hypothesis that site access influences the cleavage efficiency. Approximately 20 cleavage fragments of P216 were identified on the surface of M. hyopneumoniae by LC-MS/MS analysis of biotinylated proteins and 2D SDS-PAGE. LC-MS/MS analysis of semitryptic peptides within P216 identified novel cleavage sites. Moreover, detection of a series of overlapping semitryptic peptides that differed by the loss a single amino acid at their N-terminus is consistent with aminopeptidase activity on the surface of M. hyopneumoniae. P120 and P85 and their cleavage fragments bind heparin and cell-surface proteins derived from porcine epithelial-like cells, indicating that P216 cleavage fragments retain the ability to bind glycosaminoglycans.
MHJ_0493(P216)是猪肺炎支原体中高度表达的纤毛黏附素。P216 在 S/T-X-F↓-X-D/E 样基序(1072)T-N-F↓Q-E(1076)中的 1074 位发生裂解,在猪肺炎支原体表面产生 120 kDa(P120)和 85 kDa(P85)的 N 端和 C 端片段。在这里,我们表明 P216 中存在几个 S/T-X-F↓X-D/E 样基序,但只有(1072)T-N-F↓Q-E(1076)和(1344)I-T-F↓A-D-Y(1349)被确定为真正的加工位点,方法是识别与苯丙氨酸残基裂解一致的半酶解肽。S/T-X-F↓-X-D/E 样基序位于或毗邻大于 40 个连续氨基酸的蛋白质无序区,这与我们的假设一致,即位点进入会影响裂解效率。通过对生物素化蛋白进行 LC-MS/MS 分析和 2D SDS-PAGE,在猪肺炎支原体表面鉴定出约 20 个 P216 的裂解片段。对 P216 内的半酶解肽进行 LC-MS/MS 分析,鉴定出了新的裂解位点。此外,检测到一系列重叠的半酶解肽,它们在 N 端丢失一个氨基酸,这与猪肺炎支原体表面的氨肽酶活性一致。P120 和 P85 及其裂解片段与肝素和源自猪上皮样细胞的细胞表面蛋白结合,表明 P216 裂解片段保留与糖胺聚糖结合的能力。