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大肠杆菌趋化作用全通路模型中的变化倍数检测。

Fold-change detection in a whole-pathway model of Escherichia coli chemotaxis.

机构信息

Department of Mathematics & Statistics, University of Reading, Whiteknights, PO Box 220, Reading, RG6 6AX, UK,

出版信息

Bull Math Biol. 2014 Jun;76(6):1376-95. doi: 10.1007/s11538-014-9965-3. Epub 2014 May 9.

Abstract

There has been recent interest in sensory systems that are able to display a response which is proportional to a fold change in stimulus concentration, a feature referred to as fold-change detection (FCD). Here, we demonstrate FCD in a recent whole-pathway mathematical model of Escherichia coli chemotaxis. FCD is shown to hold for each protein in the signalling cascade and to be robust to kinetic rate and protein concentration variation. Using a sensitivity analysis, we find that only variations in the number of receptors within a signalling team lead to the model not exhibiting FCD. We also discuss the ability of a cell with multiple receptor types to display FCD and explain how a particular receptor configuration may be used to elucidate the two experimentally determined regimes of FCD behaviour. All findings are discussed in respect of the experimental literature.

摘要

最近人们对能够显示与刺激浓度变化成正比的响应的感觉系统产生了兴趣,这种特性被称为折叠变化检测(FCD)。在这里,我们在大肠杆菌趋化作用的最新全途径数学模型中展示了 FCD。结果表明,信号级联中的每个蛋白质都具有 FCD,并且对动力学速率和蛋白质浓度变化具有鲁棒性。通过敏感性分析,我们发现只有信号传递团队中受体数量的变化才会导致模型不显示 FCD。我们还讨论了具有多种受体类型的细胞显示 FCD 的能力,并解释了特定的受体配置如何用于阐明 FCD 行为的两个实验确定的状态。所有发现都根据实验文献进行了讨论。

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