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基于C*-H模式和大振幅运动效应在振动圆二色光谱中的重要性:富马酸二甲酯与蒽手性加合物的实例

Importance of C*-H based modes and large amplitude motion effects in vibrational circular dichroism spectra: the case of the chiral adduct of dimethyl fumarate and anthracene.

作者信息

Passarello Marco, Abbate Sergio, Longhi Giovanna, Lepri Susan, Ruzziconi Renzo, Nicu Valentin Paul

机构信息

Dipartimento di Medicina Molecolare e Traslazionale, Università di Brescia , Viale Europa 11, 25123 Brescia, Italy.

出版信息

J Phys Chem A. 2014 Jun 19;118(24):4339-50. doi: 10.1021/jp502544v. Epub 2014 Jun 6.

Abstract

The role played by the C*-H based modes (C* being the chiral carbon atom) and the large amplitude motions in the vibrational absorption (VA) and vibrational circular dichroism (VCD) spectra is investigated. The example of an adduct of dimethyl fumarate and anthracene, i.e., dimethyl-(+)-(11R,12R)-9,10-dihydro-9,10-ethanoanthracene-11,12-dicarboxylate, and two deuterated isotopomers thereof specially synthesized for this goal, are considered. By comparing the experimental and DFT calculated spectra of the undeuterated and deuterated species, we demonstrate that the C*-H bending, rocking, and stretching modes in the VA and VCD spectra are clearly identified in well defined spectroscopic features. Further, significant information about the conformer distribution is gathered by analyzing the VA and VCD data of both the fingerprint and the C-H stretching regions, with particular attention paid to the band shape data. Effects related to the large amplitude motions of the two methoxy moieties have been simulated by performing linear transit (LT) calculations, which consists of varying systematically the relative positions of the two methoxy moieties and calculating VCD spectra for the partially optimized structures obtained in this way. The LT method allows one to improve the quality of calculated spectra, as compared to experimental results, especially in regard to relative intensities and bandwidths.

摘要

研究了基于C*-H的模式(C为手性碳原子)以及大振幅运动在振动吸收(VA)和振动圆二色性(VCD)光谱中所起的作用。以富马酸二甲酯与蒽的加合物,即二甲基-(+)-(11R,12R)-9,10-二氢-9,10-亚乙基蒽-11,12-二羧酸酯为例,并考虑了为此专门合成的其两种氘代同位素异构体。通过比较未氘代和氘代物种的实验光谱与DFT计算光谱,我们证明在明确的光谱特征中可以清楚地识别出VA和VCD光谱中的C-H弯曲、摇摆和拉伸模式。此外,通过分析指纹区和C-H拉伸区的VA和VCD数据,特别是关注谱带形状数据,收集了有关构象异构体分布的重要信息。通过进行线性过渡(LT)计算模拟了与两个甲氧基部分的大振幅运动相关的效应,该计算包括系统地改变两个甲氧基部分的相对位置,并计算以这种方式获得的部分优化结构的VCD光谱。与实验结果相比,LT方法能够提高计算光谱的质量,特别是在相对强度和带宽方面。

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