Li Ling, Song Xu
Center for Functional Genomics and Bioinformatics, Key Laboratory of Bio-resource and Eco-environment of Education, College of Life Sciences, Sichuan University, Chengdu 610064, China.
Yi Chuan. 2014 Mar;36(3):228-36.
Advances in genomics and molecular biology have led to discovery of a large group of previous uncharacterized long non-noncoding RNAs (lncRNAs). Whether all of these transcripts are functional remains to be elucidated, but emerging evidence indicates that many lncRNAs play roles in multiple biological processes and that dysregulation of lncRNAs is often associated with diseases. Of significant interest, recent studies suggest that almost all of the regulatory lncRNAs function through interacting with different biological macromolecules such as DNA, RNA, and protein. In this review, we summarize the mechanisms by which lncRNAs regulate gene expression at epigenetic, transcriptional and post-transcriptional levels, and discuss the role of lncRNAs in tumorigenesis and host defense. Distinct from small ncRNAs that regulate gene expression mainly through base pairing to target transcripts, most identified lncRNAs function by regu-lating protein activity or maintaining the integrity of protein complexes. As a result, identification and characterization of the lncRNA-protein interactions may be the primary task to decode functional lncRNAs.
基因组学和分子生物学的进展已促使发现了一大批以前未被表征的长链非编码RNA(lncRNA)。所有这些转录本是否都具有功能仍有待阐明,但新出现的证据表明,许多lncRNA在多种生物学过程中发挥作用,并且lncRNA的失调通常与疾病相关。特别值得关注的是,最近的研究表明,几乎所有的调控lncRNA都是通过与不同的生物大分子如DNA、RNA和蛋白质相互作用来发挥功能的。在这篇综述中,我们总结了lncRNA在表观遗传、转录和转录后水平上调控基因表达的机制,并讨论了lncRNA在肿瘤发生和宿主防御中的作用。与主要通过与靶转录本碱基配对来调控基因表达的小非编码RNA不同,大多数已鉴定的lncRNA是通过调节蛋白质活性或维持蛋白质复合物的完整性来发挥功能的。因此,鉴定和表征lncRNA-蛋白质相互作用可能是解码功能性lncRNA的首要任务。