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基于多位点序列分型和多位点可变数目串联重复序列分析的匈牙利牛支原体分离株系统发育研究

Phylogeny of Mycoplasma bovis isolates from Hungary based on multi locus sequence typing and multiple-locus variable-number tandem repeat analysis.

作者信息

Sulyok Kinga M, Kreizinger Zsuzsa, Fekete Lilla, Jánosi Szilárd, Schweitzer Nóra, Turcsányi Ibolya, Makrai László, Erdélyi Károly, Gyuranecz Miklós

机构信息

Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Hungária körút 21, Budapest 1143, Hungary.

出版信息

BMC Vet Res. 2014 May 7;10:108. doi: 10.1186/1746-6148-10-108.

Abstract

BACKGROUND

Mycoplasma bovis is an important pathogen causing pneumonia, mastitis and arthritis in cattle worldwide. As this agent is primarily transmitted by direct contact and spread through animal movements, efficient genotyping systems are essential for the monitoring of the disease and for epidemiological investigations. The aim of this study was to compare and evaluate the multi locus sequence typing (MLST) and the multiple-locus variable-number tandem repeat (VNTR) analysis (MLVA) through the genetic characterization of M. bovis isolates from Hungary.

RESULTS

Thirty one Hungarian M. bovis isolates grouped into two clades by MLST. Two strains had the same sequence type (ST) as reference strain PG45, while the other twenty nine Hungarian isolates formed a novel clade comprising five subclades. Isolates originating from the same herds had the same STs except for one case. The same isolates formed two main clades and several subclades and branches by MLVA. One clade contained the reference strain PG45 and three isolates, while the other main clade comprised the rest of the strains. Within-herd strain divergence was also detected by MLVA. Little congruence was found between the results of the two typing systems.

CONCLUSIONS

MLST is generally considered an intermediate scale typing method and it was found to be discriminatory among the Hungarian M. bovis isolates. MLVA proved to be an appropriate fine scale typing tool for M. bovis as this method was able to distinguish closely related strains isolated from the same farm. We recommend the combined use of the two methods for the genotyping of M. bovis isolates. Strains have to be characterized first by MLST followed by the fine scale typing of identical STs with MLVA.

摘要

背景

牛支原体是一种在全球范围内导致牛肺炎、乳腺炎和关节炎的重要病原体。由于该病原体主要通过直接接触传播并随动物移动扩散,高效的基因分型系统对于疾病监测和流行病学调查至关重要。本研究的目的是通过对匈牙利牛支原体分离株的基因特征分析,比较和评估多位点序列分型(MLST)和多位点可变数目串联重复序列(VNTR)分析(MLVA)。

结果

通过MLST,31株匈牙利牛支原体分离株分为两个进化枝。两株菌株与参考菌株PG45具有相同的序列型(ST),而其他29株匈牙利分离株形成了一个包含五个亚进化枝的新进化枝。除一例情况外,来自同一牛群的分离株具有相同的STs。相同的分离株通过MLVA形成了两个主要进化枝以及几个亚进化枝和分支。一个进化枝包含参考菌株PG45和三株分离株,而另一个主要进化枝包含其余菌株。MLVA还检测到了牛群内菌株的差异。两种分型系统的结果之间几乎没有一致性。

结论

MLST通常被认为是一种中等规模的分型方法,并且发现在匈牙利牛支原体分离株中具有鉴别力。MLVA被证明是一种适用于牛支原体的精细分型工具,因为该方法能够区分从同一农场分离的密切相关菌株。我们建议联合使用这两种方法对牛支原体分离株进行基因分型。首先必须通过MLST对菌株进行特征分析,然后用MLVA对相同STs进行精细分型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be42/4019563/fa05ec4b6470/1746-6148-10-108-1.jpg

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