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鹿角珊瑚(Acropora millepora)的骨骼:分子与结构特征

The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization.

作者信息

Ramos-Silva Paula, Kaandorp Jaap, Herbst Frédéric, Plasseraud Laurent, Alcaraz Gérard, Stern Christine, Corneillat Marion, Guichard Nathalie, Durlet Christophe, Luquet Gilles, Marin Frédéric

机构信息

UMR 6282 Biogéosciences, Université de Bourgogne, Dijon, France; Section Computational Science, Faculty of Science, University of Amsterdam, Amsterdam, The Netherlands.

Section Computational Science, Faculty of Science, University of Amsterdam, Amsterdam, The Netherlands.

出版信息

PLoS One. 2014 Jun 3;9(6):e97454. doi: 10.1371/journal.pone.0097454. eCollection 2014.

Abstract

The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef responses to environmental changes such as temperature rise and ocean acidification (OA). In these contexts, several nucleic acid resources were made available. When combined to a recent proteomic analysis of the coral skeletal organic matrix (SOM), they enabled the identification of several skeletal matrix proteins, making A. millepora into an emerging model for biomineralization studies. Here we describe the skeletal microstructure of A. millepora skeleton, together with a functional and biochemical characterization of its occluded SOM that focuses on the protein and saccharidic moieties. The skeletal matrix proteins show a large range of isoelectric points, compositional patterns and signatures. Besides secreted proteins, there are a significant number of proteins with membrane attachment sites such as transmembrane domains and GPI anchors as well as proteins with integrin binding sites. These features show that the skeletal proteins must have strong adhesion properties in order to function in the calcifying space. Moreover this data suggest a molecular connection between the calcifying epithelium and the skeletal tissue during biocalcification. In terms of sugar moieties, the enrichment of the SOM in arabinose is striking, and the monosaccharide composition exhibits the same signature as that of mucus of acroporid corals. Finally, we observe that the interaction of the acetic acid soluble SOM on the morphology of in vitro grown CaCO3 crystals is very pronounced when compared with the calcifying matrices of some mollusks. In light of these results, we wish to commend Acropora millepora as a model for biocalcification studies in scleractinians, from molecular and structural viewpoints.

摘要

鹿角珊瑚是大堡礁中研究最多的物种之一。该物种已被用于了解刺胞动物的进化、免疫和发育过程。为了阐明珊瑚礁对诸如温度上升和海洋酸化等环境变化的反应,它还成为了多项生态学研究的对象。在这些背景下,人们获得了多种核酸资源。当与最近对珊瑚骨骼有机基质(SOM)的蛋白质组分析相结合时,这些资源使人们能够鉴定出几种骨骼基质蛋白,使鹿角珊瑚成为生物矿化研究的一个新兴模型。在此,我们描述了鹿角珊瑚骨骼的微观结构,以及对其封闭的SOM进行的功能和生化特征分析,重点关注蛋白质和糖部分。骨骼基质蛋白表现出广泛的等电点、组成模式和特征。除了分泌蛋白外,还有大量具有膜附着位点(如跨膜结构域和糖基磷脂酰肌醇锚)的蛋白以及具有整合素结合位点的蛋白。这些特征表明,骨骼蛋白必须具有很强的粘附特性才能在钙化空间中发挥作用。此外,这些数据表明在生物钙化过程中钙化上皮与骨骼组织之间存在分子联系。就糖部分而言,SOM中阿拉伯糖的富集非常显著,单糖组成与鹿角珊瑚黏液的组成具有相同的特征。最后,我们观察到,与一些软体动物的钙化基质相比,醋酸可溶性SOM对体外生长的碳酸钙晶体形态的影响非常显著。鉴于这些结果,我们希望推荐鹿角珊瑚作为从分子和结构角度研究石珊瑚生物钙化的一个模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a9d/4043741/8a521f888f8e/pone.0097454.g001.jpg

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