• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

“大分子拥挤现象被忽视了吗?”——体积排除对DNA-氨基酸复合物及其重构体的影响。

"Is macromolecular crowding overlooked?"--Effects of volume exclusion on DNA-amino acids complexes and their reconstitutes.

作者信息

Pal Priyanka D, Dongre Prabhakar M, Chitre Arunkumar V

机构信息

Department of Biophysics, University Of Mumbai, Vidyanagri Santacruz (E), Mumbai, 400098, India.

出版信息

J Fluoresc. 2014 Jul;24(4):1275-84. doi: 10.1007/s10895-014-1412-1. Epub 2014 Jun 5.

DOI:10.1007/s10895-014-1412-1
PMID:24894381
Abstract

Biological macromolecules evolve and function within intracellular environments that are crowded with other macromolecules. Crowding results in surprisingly large quantitative effects on both the rates and the equilibria of interactions involving macromolecules, but such interactions are commonly studied outside the cell in uncrowded buffers. The addition of high concentrations of natural and synthetic macromolecules to such buffers enables crowding to be mimicked in vitro, and should be encouraged as a routine variable to study. In this study, we propose to understand the changes in DNA character and its modulation in presence of macromolecules such as PEG with reference to binding parameters to amino acids using fluorescence enhancement.

摘要

生物大分子在充满其他大分子的细胞内环境中进化并发挥功能。拥挤对涉及大分子的相互作用的速率和平衡产生了惊人的巨大定量影响,但此类相互作用通常是在细胞外的非拥挤缓冲液中进行研究的。向此类缓冲液中添加高浓度的天然和合成大分子能够在体外模拟拥挤状态,应鼓励将其作为一个常规变量进行研究。在本研究中,我们建议通过荧光增强来了解在聚乙二醇等大分子存在的情况下DNA特性的变化及其对与氨基酸结合参数的调节作用。

相似文献

1
"Is macromolecular crowding overlooked?"--Effects of volume exclusion on DNA-amino acids complexes and their reconstitutes.“大分子拥挤现象被忽视了吗?”——体积排除对DNA-氨基酸复合物及其重构体的影响。
J Fluoresc. 2014 Jul;24(4):1275-84. doi: 10.1007/s10895-014-1412-1. Epub 2014 Jun 5.
2
Macromolecular crowding: obvious but underappreciated.大分子拥挤现象:显而易见却未得到充分重视。
Trends Biochem Sci. 2001 Oct;26(10):597-604. doi: 10.1016/s0968-0004(01)01938-7.
3
Implications of Volume Exclusion: A Look at Thermodynamic Perspective of DNA-Hemoglobin Complexes and Their Reconstitutes Under Macromolecular Crowding.体积排除的影响:从热力学角度看DNA-血红蛋白复合物及其在大分子拥挤条件下的重构物
J Fluoresc. 2016 Jan;26(1):355-62. doi: 10.1007/s10895-015-1721-z. Epub 2015 Nov 10.
4
Metabolic buffering exerted by macromolecular crowding on DNA-DNA interactions: origin and physiological significance.大分子拥挤对DNA-DNA相互作用的代谢缓冲作用:起源及生理意义。
Biochemistry. 2003 Mar 4;42(8):2431-40. doi: 10.1021/bi026775x.
5
Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).大分子拥挤现象:化学与物理邂逅生物学(瑞士阿斯科纳,2012年6月10日至14日)
Phys Biol. 2013 Aug;10(4):040301. doi: 10.1088/1478-3975/10/4/040301. Epub 2013 Aug 2.
6
Resolving the enthalpy of protein stabilization by macromolecular crowding.解析大分子拥挤对蛋白质稳定性的焓变。
Protein Sci. 2023 Mar;32(3):e4573. doi: 10.1002/pro.4573.
7
Macromolecular crowding in biological systems: hydrodynamics and NMR methods.生物系统中的大分子拥挤现象:流体动力学和核磁共振方法。
J Mol Recognit. 2004 Sep-Oct;17(5):397-407. doi: 10.1002/jmr.694.
8
Macromolecular Crowding and DNA: Bridging the Gap between In Vitro and In Vivo.大分子拥挤与 DNA:连接体外与体内的桥梁。
Int J Mol Sci. 2023 Dec 15;24(24):17502. doi: 10.3390/ijms242417502.
9
How can macromolecular crowding inhibit biological reactions? The enhanced formation of DNA nanoparticles.大分子拥挤如何抑制生物反应?DNA纳米颗粒的增强形成。
Sci Rep. 2016 Feb 23;6:22033. doi: 10.1038/srep22033.
10
Quantification of macromolecule crowding at single-molecule level.定量分析单分子水平的生物大分子拥挤效应。
Phys Rev E. 2023 Jul;108(1-1):014406. doi: 10.1103/PhysRevE.108.014406.

引用本文的文献

1
Calcific Aortic Valve Disease: Part 1--Molecular Pathogenetic Aspects, Hemodynamics, and Adaptive Feedbacks.钙化性主动脉瓣疾病:第1部分——分子发病机制、血流动力学及适应性反馈
J Cardiovasc Transl Res. 2016 Apr;9(2):102-18. doi: 10.1007/s12265-016-9679-z. Epub 2016 Feb 18.
2
Implications of Volume Exclusion: A Look at Thermodynamic Perspective of DNA-Hemoglobin Complexes and Their Reconstitutes Under Macromolecular Crowding.体积排除的影响:从热力学角度看DNA-血红蛋白复合物及其在大分子拥挤条件下的重构物
J Fluoresc. 2016 Jan;26(1):355-62. doi: 10.1007/s10895-015-1721-z. Epub 2015 Nov 10.

本文引用的文献

1
Effects of molecular crowding on the structures, interactions, and functions of nucleic acids.分子拥挤对核酸的结构、相互作用及功能的影响。
Chem Rev. 2014 Mar 12;114(5):2733-58. doi: 10.1021/cr400113m. Epub 2013 Dec 23.
2
Effects of macromolecular crowding on genetic networks.大分子拥挤对遗传网络的影响。
Biophys J. 2011 Dec 21;101(12):2882-91. doi: 10.1016/j.bpj.2011.10.053. Epub 2011 Dec 20.
3
The interaction of quinacrine with adenine nucleotides.奎纳克林与腺嘌呤核苷酸的相互作用。
J Biol Chem. 1954 Sep;210(1):45-56.
4
Macromolecular crowding: obvious but underappreciated.大分子拥挤现象:显而易见却未得到充分重视。
Trends Biochem Sci. 2001 Oct;26(10):597-604. doi: 10.1016/s0968-0004(01)01938-7.
5
Macromolecular crowding and the mandatory condensation of DNA in bacteria.大分子拥挤与细菌中DNA的强制凝聚
FEBS Lett. 1996 Jul 29;390(3):245-8. doi: 10.1016/0014-5793(96)00725-9.
6
Macromolecular crowding effects on macromolecular interactions: some implications for genome structure and function.大分子拥挤对大分子相互作用的影响:对基因组结构和功能的一些启示。
Biochim Biophys Acta. 1993 Nov 16;1216(2):175-85. doi: 10.1016/0167-4781(93)90142-z.
7
Macromolecular crowding: biochemical, biophysical, and physiological consequences.大分子拥挤效应:生物化学、生物物理及生理学后果
Annu Rev Biophys Biomol Struct. 1993;22:27-65. doi: 10.1146/annurev.bb.22.060193.000331.
8
Model nucleoprotein complexes: studies on the interaction of cationic homopolypeptides with DNA.模型核蛋白复合物:阳离子同聚多肽与DNA相互作用的研究
J Mol Biol. 1967 Mar 14;24(2):157-76. doi: 10.1016/0022-2836(67)90324-5.