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P-糖蛋白ATP水解及钒酸盐诱导捕获模型的动力学验证。关于额外步骤的提议。

Kinetic validation of the models for P-glycoprotein ATP hydrolysis and vanadate-induced trapping. Proposal for additional steps.

作者信息

Lugo Miguel Ramón, Sharom Frances Jane

机构信息

Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.

出版信息

PLoS One. 2014 Jun 4;9(6):e98804. doi: 10.1371/journal.pone.0098804. eCollection 2014.

Abstract

P-Glycoprotein, a member of the ATP-binding cassette (ABC) superfamily, is a multidrug transporter responsible for cellular efflux of hundreds of structurally unrelated compounds, including natural products, many clinically used drugs and anti-cancer agents. Expression of P-glycoprotein has been linked to multidrug resistance in human cancers. ABC transporters are driven by ATP hydrolysis at their two cytoplasmic nucleotide-binding domains, which interact to form a closed ATP-bound sandwich dimer. Intimate knowledge of the catalytic cycle of these proteins is clearly essential for understanding their mechanism of action. P-Glycoprotein has been proposed to hydrolyse ATP by an alternating mechanism, for which there is substantial experimental evidence, including inhibition of catalytic activity by trapping of ortho-vanadate at one nucleotide-binding domain, and the observation of an asymmetric occluded state. Despite many studies of P-glycoprotein ATPase activity over the past 20 years, no comprehensive kinetic analysis has yet been carried out, and some puzzling features of its behaviour remain unexplained. In this work, we have built several progressively more complex kinetic models, and then carried out simulations and detailed analysis, to test the validity of the proposed reaction pathway employed by P-glycoprotein for ATP hydrolysis. To establish kinetic parameters for the catalytic cycle, we made use of the large amount of published data on ATP hydrolysis by hamster P-glycoprotein, both purified and in membrane vesicles. The proposed kinetic scheme(s) include a high affinity priming reaction for binding of the first ATP molecule, and an independent pathway for ADP binding outside the main catalytic cycle. They can reproduce to varying degrees the observed behavior of the protein's ATPase activity and its inhibition by ortho-vanadate. The results provide new insights into the mode of action of P-glycoprotein, and some hypotheses about the nature of the occluded nucleotide-bound state.

摘要

P-糖蛋白是ATP结合盒(ABC)超家族的成员之一,是一种多药转运蛋白,负责数百种结构不相关化合物的细胞外排,这些化合物包括天然产物、许多临床使用的药物和抗癌药物。P-糖蛋白的表达与人类癌症中的多药耐药性有关。ABC转运蛋白由其两个胞质核苷酸结合结构域处的ATP水解驱动,这两个结构域相互作用形成一个封闭的ATP结合夹心二聚体。深入了解这些蛋白质的催化循环对于理解其作用机制显然至关重要。有人提出P-糖蛋白通过交替机制水解ATP,对此有大量实验证据,包括通过在一个核苷酸结合结构域捕获原钒酸盐抑制催化活性,以及观察到不对称的封闭状态。尽管在过去20年里对P-糖蛋白ATP酶活性进行了许多研究,但尚未进行全面的动力学分析,其行为的一些令人困惑的特征仍未得到解释。在这项工作中,我们构建了几个逐渐更复杂的动力学模型,然后进行模拟和详细分析,以测试P-糖蛋白用于ATP水解的拟议反应途径的有效性。为了确定催化循环的动力学参数,我们利用了大量已发表的关于仓鼠P-糖蛋白(纯化的和膜囊泡中的)ATP水解的数据。拟议的动力学方案包括对第一个ATP分子结合的高亲和力引发反应,以及在主要催化循环之外的ADP结合的独立途径。它们可以不同程度地重现观察到的蛋白质ATP酶活性及其被原钒酸盐抑制的行为。这些结果为P-糖蛋白的作用模式提供了新的见解,以及一些关于封闭的核苷酸结合状态性质的假设。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc91/4045855/9d722d2acc06/pone.0098804.g001.jpg

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