Mei Xiaofen, Xu Kai, Yang Lingling, Yuan Zhiming, Mahillon Jacques, Hu Xiaomin
Key Laboratory of Agricultural and Environmental Microbiology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China.
BMC Microbiol. 2014 Jun 7;14:149. doi: 10.1186/1471-2180-14-149.
Cereulide is a cyclic dodecadepsipeptide ionophore, produced via non-ribosomal peptide synthetases (NRPS), which in rare cases can lead to human death. Early studies had shown that emetic toxin formation belongs to a homogeneous group of Bacillus cereus sensu stricto and the genetic determinants of cereulide (a 24-kb gene cluster of cesHPTABCD) are located on a 270-kb plasmid related to the Bacillus anthracis virulence plasmid pXO1.
The whole genome sequences from seven emetic isolates, including two B. cereus sensu stricto and five Bacillus weihenstephanensis strains, were compared, and their inside and adjacent DNA sequences of the cereulide biosynthesis gene clusters were analyzed. The sequence diversity was observed, which classified the seven emetic isolates into three clades. Different genomic locations of the cereulide biosynthesis gene clusters, plasmid-borne and chromosome-borne, were also found. Potential mobile genetic elements (MGEs) were identified in the flanking sequences of the ces gene cluster in all three types. The most striking observation was the identification of a putative composite transposon, Tnces, consisting of two copies of ISces element (belonging to IS6 family) in opposite orientations flanking the ces gene cluster in emetic B. weihenstephanensis. The mobility of this element was tested by replacing the ces gene cluster by a KmR gene marker and performing mating-out transposition assays in Escherichia coli. The results showed that Tnces::km transposes efficiently (1.04 × 10(-3) T/R) and produces 8-bp direct repeat (DR) at the insertion sites.
Cereulide biosynthesis gene clusters display sequence diversity, different genomic locations and association with MGEs, in which the transposition capacity of a resistant derivative of the composite transposon Tnces in E. coli was demonstrated. Further study is needed to look for appropriate genetic tools to analysis the transposition of Tnces in Bacillus spp. and the dynamics of other MGEs flanking the ces gene clusters.
蜡样芽胞杆菌溶血素是一种环状十二肽离子载体,通过非核糖体肽合成酶(NRPS)产生,在极少数情况下可导致人类死亡。早期研究表明,催吐毒素的形成属于蜡样芽胞杆菌狭义群的一个同质组,蜡样芽胞杆菌溶血素的遗传决定因素(一个24 kb的cesHPTABCD基因簇)位于一个与炭疽芽孢杆菌毒力质粒pXO1相关的270 kb质粒上。
比较了7株产呕吐毒素菌株的全基因组序列,包括2株蜡样芽胞杆菌狭义群菌株和5株韦氏芽孢杆菌菌株,并分析了蜡样芽胞杆菌溶血素生物合成基因簇的内部和相邻DNA序列。观察到序列多样性,将这7株产呕吐毒素菌株分为三个进化枝。还发现了蜡样芽胞杆菌溶血素生物合成基因簇在基因组中的不同位置,分别位于质粒和染色体上。在所有三种类型的ces基因簇侧翼序列中都鉴定出了潜在的可移动遗传元件(MGEs)。最引人注目的发现是在产呕吐毒素的韦氏芽孢杆菌中鉴定出一个假定的复合转座子Tnces,它由两个相反方向的ISces元件(属于IS6家族)拷贝组成,位于ces基因簇两侧。通过用KmR基因标记替换ces基因簇并在大肠杆菌中进行交配转座试验,测试了该元件的移动性。结果表明,Tnces::km能够高效转座(1.04×10-3 T/R),并在插入位点产生8 bp的直接重复序列(DR)。
蜡样芽胞杆菌溶血素生物合成基因簇表现出序列多样性、不同的基因组位置以及与MGEs的关联,其中复合转座子Tnces的抗性衍生物在大肠杆菌中的转座能力得到了证实。需要进一步研究寻找合适的遗传工具,以分析Tnces在芽孢杆菌属中的转座情况以及ces基因簇侧翼其他MGEs的动态变化。