Nedashkovskaya Olga I, Kukhlevskiy Andrey D, Zhukova Natalia V, Kim Seung Bum
G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, 690022, Vladivostok, Russia,
Antonie Van Leeuwenhoek. 2014 Sep;106(3):421-9. doi: 10.1007/s10482-014-0210-8. Epub 2014 Jun 15.
A facultatively anaerobic, Gram-stain negative, rod-shaped and yellow pigmented bacterium, designated strain IDSW-73(T), was isolated from a seawater sample and subjected to a polyphasic taxonomic study. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the novel strain formed a distinct phyletic line in the family Flavobacteriaceae and is most closely related to the members of the genus Leeuwenhoekiella, with 16S rRNA gene sequence similarity of 91.4-92.6 %. Strain IDSW-73(T) was found to be able to grow with 0-12 % NaCl and at 4-33 °C; and was able to hydrolyse gelatin, starch and Tweens 20, 40 and 80. The DNA G+C content was determined to be 42.2 mol%. The predominant cellular fatty acids were identified as branched-chain saturated and unsaturated and straight-chain unsaturated fatty acids such as iso-C15:0, iso-C15:1, iso-C17:1 ω9c, C15:1 ω6c, iso-C15:0 3-OH, iso-C17:0 3-OH and summed feature 3 (as defined by MIDI), comprising iso-C15:0 2-OH and/or C16:1 ω7c. The polar lipids found were phosphatidylethanolamine, two unknown aminolipids and one unknown lipid. The major respiratory quinone was identified as MK-6. The significant molecular distinctiveness between the novel isolate and its nearest neighbours were strongly supported by notable differences in physiological and biochemical tests. Therefore, strain IDSW-73(T) is considered to represent a novel genus and species within the family Flavobacteriaceae, for which the name Flavimarina pacifica gen. nov., sp. nov. is proposed. The type strain is IDSW-73(T) (=KCTC 32466(T) = KMM 6759(T)). Emended descriptions of the recognized species of the genus Leeuwenhoekiella are also proposed.
从海水样本中分离出一株兼性厌氧、革兰氏染色阴性、杆状且产黄色色素的细菌,命名为菌株IDSW-73(T),并对其进行了多相分类研究。基于16S rRNA基因序列的系统发育分析表明,该新菌株在黄杆菌科中形成了一个独特的进化分支,与列文虎克氏菌属的成员关系最为密切,16S rRNA基因序列相似性为91.4-92.6%。发现菌株IDSW-73(T)能够在0-12% NaCl浓度和4-33 °C条件下生长;并且能够水解明胶、淀粉以及吐温20、40和80。测定其DNA G+C含量为42.2 mol%。主要的细胞脂肪酸被鉴定为支链饱和与不饱和脂肪酸以及直链不饱和脂肪酸,如异-C15:0、异-C15:1、异-C17:1 ω9c、C15:1 ω6c、异-C15:0 3-OH、异-C17:0 3-OH以及总和特征3(如MIDI所定义,包括异-C15:0 2-OH和/或C16:1 ω7c)。所发现的极性脂类为磷脂酰乙醇胺、两种未知氨基脂类和一种未知脂类。主要呼吸醌被鉴定为MK-6。新分离菌株与其最接近的亲缘种之间在生理生化测试方面的显著差异有力地支持了它们在分子水平上的明显区别。因此,菌株IDSW-73(T)被认为代表黄杆菌科中的一个新属和新种,为此提议将其命名为太平洋黄海菌(Flavimarina pacifica),新属,新种。模式菌株为IDSW-73(T)(=KCTC 32466(T) = KMM 6759(T))。同时还提议对列文虎克氏菌属已确认种的描述进行修订。