Oceanography Section, Kochi University, Kohasu, Oko, Nankoku, Kochi 783-8505, Japan.
TechnoSuruga Laboratory Co. Ltd, 330 Nagasaki, Shimizu-ku, Shizuoka 424-0065, Japan.
Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3075-3080. doi: 10.1099/ijs.0.063685-0. Epub 2014 Jun 18.
A Gram-stain-negative, motile, mesophilic, aerobic, rod-shaped bacterium, strain 5-11(T), was isolated from surface seawater at Muroto city, Kochi prefecture, Japan. The strain exhibited a narrow growth temperature range of 20-30 °C. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain fell within the order Kordiimonadales in the class Alphaproteobacteria and was related most closely to the genus Kordiimonas (up to 91.2 % similarity to the type strains of species of the genus) but branched deeply from species of Kordiimonas. The major fatty acids were iso-C17 : 1ω9c, iso-C15 : 0, and C16 : 1ω7c and/or iso-C15 : 0 2-OH. Ubiquinone-10 (Q-10) was detected as the sole isoprenoid quinone. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and one unidentified aminolipid. Although strains of Kordiimonas have been shown to contain unidentified glycolipids, they were not detected from strain 5-11(T). The DNA G+C content of strain 5-11(T) was 44.3 mol%, a value that was lower than those of strains of Kordiimonas (50-58 mol%) and was relatively low for the members of the class Alphaproteobacteria. On the basis of phenotypic, genotypic and chemotaxonomic data, it is proposed that strain 5-11(T) represents a novel species of a new genus, Temperatibacter marinus gen. nov., sp. nov., within a new family Temperatibacteraceae fam. nov. The type strain of Temperatibacter marinus is 5-11(T) ( = NBRC 110045(T) = LMG 28278(T)).
从日本高知县室户市的表层海水中分离到一株革兰氏阴性、运动性、中温、需氧、杆状细菌,菌株 5-11(T)。该菌株的生长温度范围较窄,为 20-30°C。基于 16S rRNA 基因序列的系统发育分析表明,该菌株属于α变形菌纲的 Kordiimonadales 目,与 Kordiimonas 属最为密切相关(与属内各物种的模式菌株相似度高达 91.2%),但与 Kordiimonas 属的各物种分支较深。主要脂肪酸为 iso-C17:1ω9c、iso-C15:0 和 C16:1ω7c 和/或 iso-C15:0 2-OH。检测到唯一的异戊烯醌为泛醌-10(Q-10)。主要的极性脂为磷脂酰乙醇胺、磷脂酰甘油和一种未鉴定的氨基脂。尽管 Kordiimonas 菌株被证明含有未鉴定的糖脂,但它们未从 5-11(T)菌株中检测到。5-11(T)菌株的 DNA G+C 含量为 44.3 mol%,低于 Kordiimonas 菌株(50-58 mol%),也低于 α变形菌纲的其他成员。基于表型、基因型和化学分类数据,建议菌株 5-11(T)代表一个新属新种,命名为海洋适温杆菌(Temperatibacter marinus),属名和种名均为拉丁文形容词。海洋适温杆菌的模式菌株为 5-11(T)(=NBRC 110045(T)=LMG 28278(T))。