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胞嘧啶中的电离诱导互变异构化及溶剂化效应。

Ionization-induced tautomerization in cytosine and effect of solvation.

作者信息

Das Tamal, Ghosh Debashree

机构信息

Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory , Pune 411008, India.

出版信息

J Phys Chem A. 2014 Jul 17;118(28):5323-32. doi: 10.1021/jp503947d. Epub 2014 Jul 8.

Abstract

The recent observation of excitation-induced tautomerization in gas-phase cytosine motivated us to investigate the possibility of facile tautomerization in ionized cytosine and the effect of solvation on the tautomerization barriers. The tautomerization mechanisms were characterized at the density functional theory (DFT)/ωB97X-D and coupled-cluster singles and doubles (CCSD) levels of theory. Vertical and adiabatic ionization energies (VIEs and AIEs, respectively) of the tautomers of cytosine and the microsolvated species were calculated with the equation-of-motion ionization-potential coupled-cluster (EOM-IP-CCSD) method. We observed that, in microsolvated cytosine, the solvatochromic shifts of the VIEs can be both blue- and red-shifted depending on the tautomers. This is explained by the analysis of the charge-dipole interactions between the cytosine and water molecules. We noticed that, upon ionization, gas-phase tautomerization barriers are reduced by 0-4 kcal/mol, whereas microsolvated (with one water) tautomerization barriers are reduced by 4-5 kcal/mol. We also investigated the tautomerization process in solvation using a continuum model with one active water molecule in the quantum mechanical region. We noticed that, even though bulk solvation has a significant effect on ionization energies, its effect on the ionization-induced tautomerization barrier is minimal.

摘要

最近在气相胞嘧啶中观察到激发诱导的互变异构,这促使我们研究离子化胞嘧啶中发生 facile 互变异构的可能性以及溶剂化对互变异构能垒的影响。互变异构机制在密度泛函理论(DFT)/ωB97X-D 和耦合簇单双激发(CCSD)理论水平上进行了表征。利用运动方程电离势耦合簇(EOM-IP-CCSD)方法计算了胞嘧啶及其微溶剂化物种互变异构体的垂直和绝热电离能(分别为 VIEs 和 AIEs)。我们观察到,在微溶剂化的胞嘧啶中,VIEs 的溶剂化显色位移根据互变异构体的不同既可能发生蓝移也可能发生红移。这通过对胞嘧啶和水分子之间电荷 - 偶极相互作用的分析得到了解释。我们注意到,在电离时,气相互变异构能垒降低了 0 - 4 kcal/mol,而微溶剂化(含一个水分子)的互变异构能垒降低了 4 - 5 kcal/mol。我们还使用量子力学区域中有一个活性水分子的连续介质模型研究了溶剂化中的互变异构过程。我们注意到,尽管本体溶剂化对电离能有显著影响,但其对电离诱导的互变异构能垒的影响最小。

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