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使用贝叶斯反向计算方法估计癌症发病率。

Estimating cancer incidence using a Bayesian back-calculation approach.

作者信息

Ventura Leonardo, Mezzetti Maura

机构信息

Cancer Prevention and Research Institute, Florence, Italy.

出版信息

Stat Med. 2014 Nov 10;33(25):4453-68. doi: 10.1002/sim.6240. Epub 2014 Jun 23.

DOI:10.1002/sim.6240
PMID:24957915
Abstract

We propose a Bayesian hierarchical model for the calculation of incidence counts from mortality data by a convolution equation that expresses mortality through its relationship with incidence and the survival probability density. The basic idea is to use mortality data together with an estimate of the survival distribution from cancer incidence to cancer mortality to reconstruct the numbers of individuals who constitute previously incident cases that give rise to the observed pattern of cancer mortality. This model is novel because it takes into account the uncertainty from the survival distribution; thus, a Bayesian-mixture cure model for survival is introduced. Furthermore, projections are obtained starting from a Bayesian age-period-cohort model. The main advantage of the proposed approach is its consideration of the three components of the model: the convolution equation, the survival mixture cure model and the age-period-cohort projection within a directed acyclic graph model. Furthermore, the estimation are obtained through the Gibbs sampler. We applied the model to cases of women with stomach cancer using six age classes [15-45], [45-55], [55-65], [65-75], [75-85] and [85-95] and validated it by using data from the Tuscany Cancer Registry. The model proposed and the program implemented are convenient because they allow different cancer disease to be analysed because the survival time is modelled by flexible distributions that are able to describe different trends.

摘要

我们提出了一种贝叶斯分层模型,用于通过一个卷积方程从死亡率数据计算发病率计数,该卷积方程通过死亡率与发病率和生存概率密度的关系来表达死亡率。基本思想是将死亡率数据与从癌症发病到癌症死亡的生存分布估计结合起来,以重建构成先前发病病例的个体数量,这些病例导致了观察到的癌症死亡模式。该模型具有创新性,因为它考虑了生存分布的不确定性;因此,引入了一种用于生存的贝叶斯混合治愈模型。此外,预测是从贝叶斯年龄-时期-队列模型开始获得的。所提出方法的主要优点是在有向无环图模型中考虑了模型的三个组成部分:卷积方程、生存混合治愈模型和年龄-时期-队列预测。此外,估计是通过吉布斯采样器获得的。我们将该模型应用于患有胃癌的女性病例,使用六个年龄组[15 - 45]、[45 - 55]、[55 - 65]、[65 - 75]、[75 - 85]和[85 - 95],并使用托斯卡纳癌症登记处的数据对其进行了验证。所提出的模型和实施的程序很方便,因为它们允许对不同的癌症疾病进行分析,因为生存时间是由能够描述不同趋势的灵活分布建模的。

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Estimating cancer incidence using a Bayesian back-calculation approach.使用贝叶斯反向计算方法估计癌症发病率。
Stat Med. 2014 Nov 10;33(25):4453-68. doi: 10.1002/sim.6240. Epub 2014 Jun 23.
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Bayesian area-age-period-cohort model with carcinogenesis age effects in estimating cancer mortality.贝叶斯面积-年龄-时期-队列模型在估计癌症死亡率中的致癌作用
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A hierarchical Bayesian approach to age-specific back-calculation of cancer incidence rates.一种用于特定年龄癌症发病率反向计算的分层贝叶斯方法。
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Bayesian semi-parametric ZIP models with space-time interactions: an application to cancer registry data.具有时空交互作用的贝叶斯半参数零膨胀泊松模型:在癌症登记数据中的应用
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