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肿瘤坏死因子-α基因多态性作为囊性纤维化的潜在修饰基因

TNF-alpha polymorphisms as a potential modifier gene in the cystic fibrosis.

作者信息

Coutinho Cyntia Aac, Marson Fernando Al, Marcelino Aline Rb, Bonadia Luciana C, Carlin Marcelo P, Ribeiro Antonio F, Ribeiro Jose D, Bertuzzo Carmen S

机构信息

Department of Medical Genetics, Faculty of Medical Sciences, University of Campinas 13081-970, P.O. Box: 6111, Campinas, SP, Brazil.

Department of Medical Genetics, Faculty of Medical Sciences, University of Campinas 13081-970, P.O. Box: 6111, Campinas, SP, Brazil ; Department of Pediatrics, School of Medical Sciences, University of Campinas 13081-970, P.O. Box: 6111, Campinas, SP, Brazil.

出版信息

Int J Mol Epidemiol Genet. 2014 May 29;5(2):87-99. eCollection 2014.

Abstract

Modifier genes, as the TNF-α gene, can modulate the cystic fibrosis (CF) severity. Thus, -238G>A and -308G>A polymorphisms of TNF-α gene were analyzed as modifiers of CF. In this context, the present study enrolled 49 CF patients (diagnosis performed by sweat test and complete CFTR screening). The -238G>A polymorphism analysis was performed by ARMS-PCR, and -308G>A, by PCR-RFLP. In our data, the -238G>A polymorphism was not associated with clinical variability. The AA genotype for -308G>A polymorphism was a risk factor for early gastrointestinal symptoms (OR=5.98, 95%CI=1.06-49.68) and protection for the first Pseudomonas aeruginosa (OR=0.05, 95%CI=0.0003-0.007). For the first P. aeruginosa, GA genotype was a risk factor (OR=10.2, 95%CI=1.86-84.09); for the same genotype, the diagnosis was made in minor time than the AA genotype (p=0.031). Considering the -308G>A polymorphism alleles, the G allele was a risk factor for early pulmonary symptoms (OR=3.81, 95%CI=1.13-12.97) and P. aeruginosa (OR=66.77, 95%CI=15.18-482.7); however, the same allele showed better transcutaneous oxygen saturation (OR=9.24, 95%CI=1.53-206.1). The A allele was a protective factor for early pulmonary symptoms (OR=12.26, 95%CI=0.08-0.89) and P. aeruginosa (OR=12.15, 95%CI=0002-0007), however, the same allele was a risk factor for worst transcutaneous oxygen saturation (OR=7.01, 95%CI=1.14-157.4). As conclusion, the -308G>A polymorphism of the TNF-α gene was associated with the CF severity.

摘要

修饰基因,如肿瘤坏死因子-α(TNF-α)基因,可调节囊性纤维化(CF)的严重程度。因此,对TNF-α基因的-238G>A和-308G>A多态性作为CF的修饰因子进行了分析。在此背景下,本研究纳入了49例CF患者(通过汗液试验和完整的囊性纤维化跨膜传导调节因子(CFTR)筛查进行诊断)。-238G>A多态性分析采用扩增阻滞突变系统聚合酶链反应(ARMS-PCR)进行,-308G>A多态性分析采用聚合酶链反应-限制性片段长度多态性分析(PCR-RFLP)进行。在我们的数据中,-238G>A多态性与临床变异性无关。-308G>A多态性的AA基因型是早期胃肠道症状的危险因素(比值比(OR)=5.98,95%置信区间(CI)=1.06-49.68),对首次感染铜绿假单胞菌有保护作用(OR=0.05,95%CI=0.0003-0.007)。对于首次感染铜绿假单胞菌,GA基因型是危险因素(OR=10.2,95%CI=1.86-84.09);对于相同基因型,诊断时间比AA基因型短(p=0.031)。考虑-308G>A多态性等位基因,G等位基因是早期肺部症状的危险因素(OR=3.81,95%CI=1.13-12.97)和铜绿假单胞菌感染的危险因素(OR=66.77,95%CI=15.18-482.7);然而,相同等位基因显示经皮血氧饱和度较好(OR=9.24,95%CI=1.53-206.1)。A等位基因是早期肺部症状的保护因子(OR=12.26,95%CI=0.08-0.89)和铜绿假单胞菌感染的保护因子(OR=12.15,95%CI=0.002-0.007),然而,相同等位基因是经皮血氧饱和度最差的危险因素(OR=7.01,95%CI=1.14-157.4)。结论是,TNF-α基因的-308G>A多态性与CF的严重程度相关。

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