Gao Xiao-Jin, Hou Sheng-Ping, Li Ping-Hua
Department of Ophthalmology, Chengdu First People's Hospital, Chengdu 610017, Sichuan Province, China ; Chongqing Key Laboratory of Ophthalmology, Chongqing 400016, China.
Department of Ophthalmology, the First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, China ; Chongqing Key Laboratory of Ophthalmology, Chongqing 400016, China.
Int J Ophthalmol. 2014 Jun 18;7(3):397-402. doi: 10.3980/j.issn.2222-3959.2014.03.02. eCollection 2014.
To examine the association between the single nucleotide polymorphisms (SNPs) of matrix metalloprotease-9 (MMP-9) gene and primary angle-closure glaucoma (PACG) in a Chinese Han population.
DNA samples were extracted from peripheral-blood mononuclear cells of 214 PACG patients and 224 healthy controls. Genotyping of rs3918249, rs3918254, rs17577 and rs3787268 in MMP-9 was performed using polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) analysis and the direct sequencing technique. The association between these genetic polymorphisms and risk of PACG was estimated by χ (2) test.
The distributions of rs3918249, rs3918254, rs17577 and rs3787268 genotypes among cases and healthy controls were compatible with that from Hardy-Weinberg equilibrium (HWE, P>0.05).The increased frequency of CC and CT genotypes of rs3918254 were observed in PACG patients compared to healthy controls [P=0.006, Pcorrected (Pcorr)=0.048]. The haplotype analysis showed that the CCGG haplotype was nominal associated with PACG (P=0.015), however, the significant was lost when the Bonferroni correction was used (Pcorr=0.105).
Our results revealed that rs3918254 in MMP-9 may be a susceptible locus to PACG in China, people with the CC and CT genotypes of rs3918254 are more susceptible to PACG. The susceptibility to PACG in Chinese Han patients may be not influenced by SNPs rs3918249, rs3787268 and rs17577 in MMP-9.
研究基质金属蛋白酶-9(MMP-9)基因单核苷酸多态性(SNP)与中国汉族人群原发性闭角型青光眼(PACG)之间的关联。
从214例PACG患者和224例健康对照者的外周血单个核细胞中提取DNA样本。采用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)分析和直接测序技术对MMP-9基因中的rs3918249、rs3918254、rs17577和rs3787268进行基因分型。通过χ²检验评估这些基因多态性与PACG风险之间的关联。
病例组和健康对照组中rs3918249、rs3918254、rs17577和rs3787268基因型的分布符合Hardy-Weinberg平衡(HWE,P>0.05)。与健康对照组相比,PACG患者中rs3918254的CC和CT基因型频率增加[P=0.006,校正P值(Pcorr)=0.048]。单倍型分析显示,CCGG单倍型与PACG存在名义上的关联(P=0.015),然而,使用Bonferroni校正后显著性消失(Pcorr=0.105)。
我们的结果显示,MMP-9基因中的rs3918254可能是中国人群中PACG的一个易感位点,rs3918254的CC和CT基因型个体更易患PACG。中国汉族患者对PACG的易感性可能不受MMP-9基因中rs3918249、rs378