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植物中富含亮氨酸重复(LRR)结构域的介入基序。

Leucine-Rich Repeat (LRR) Domains Containing Intervening Motifs in Plants.

机构信息

Division of Biophysics, Center for Medical Education, Sapporo Medical University, Sapporo 060-8556, Japan.

Department of Biochemistry, School of Medicine, Sapporo Medical University, Sapporo 060-8556, Japan.

出版信息

Biomolecules. 2012 Jun 22;2(2):288-311. doi: 10.3390/biom2020288.

Abstract

LRRs (leucine rich repeats) are present in over 14,000 proteins. Non-LRR, island regions (IRs) interrupting LRRs are widely distributed. The present article reviews 19 families of LRR proteins having non-LRR IRs (LRR@IR proteins) from various plant species. The LRR@IR proteins are LRR-containing receptor-like kinases (LRR-RLKs), LRR-containing receptor-like proteins (LRR-RLPs), TONSOKU/BRUSHY1, and MJK13.7; the LRR-RLKs are homologs of TMK1/Rhg4, BRI1, PSKR, PSYR1, Arabidopsis At1g74360, and RPK2, while the LRR-RLPs are those of Cf-9/Cf-4, Cf-2/Cf-5, Ve, HcrVf, RPP27, EIX1, clavata 2, fascinated ear2, RLP2, rice Os10g0479700, and putative soybean disease resistance protein. The LRRs are intersected by single, non-LRR IRs; only the RPK2 homologs have two IRs. In most of the LRR-RLKs and LRR-RLPs, the number of repeat units in the preceding LRR block (N1) is greater than the number of the following block (N2); N1 » N2 in which N1 is variable in the homologs of individual families, while N2 is highly conserved. The five families of the LRR-RLKs except for the RPK2 family show N1 = 8 - 18 and N2 = 3 - 5. The nine families of the LRR-RLPs show N1 = 12 - 33 and N2 = 4; while N1 = 6 and N2 = 4 for the rice Os10g0479700 family and the N1 = 4 - 28 and N2 = 4 for the soybean protein family. The rule of N1 » N2 might play a common, significant role in ligand interaction, dimerization, and/or signal transduction of the LRR-RLKs and the LRR-RLPs. The structure and evolution of the LRR domains with non-LRR IRs and their proteins are also discussed.

摘要

富含亮氨酸重复序列(LRRs)存在于超过 14000 种蛋白质中。非 LRR、岛区(IRs)中断 LRRs 的广泛分布。本文综述了来自各种植物物种的 19 个具有非 LRR IR 的 LRR 蛋白家族(LRR@IR 蛋白)。LRR@IR 蛋白是含有 LRR 的受体样激酶(LRR-RLKs)、含有 LRR 的受体样蛋白(LRR-RLPs)、TONSOKU/BRUSHY1 和 MJK13.7;LRR-RLKs 是 TMK1/Rhg4、BRI1、PSKR、PSYR1、拟南芥 At1g74360 和 RPK2 的同源物,而 LRR-RLPs 是 Cf-9/Cf-4、Cf-2/Cf-5、Ve、HcrVf、RPP27、EIX1、clavata 2、fascinated ear2、RLP2、水稻 Os10g0479700 和推定的大豆抗病蛋白的同源物。LRRs 被单个非 LRR IR 交叉;只有 RPK2 同源物有两个 IR。在大多数 LRR-RLKs 和 LRR-RLPs 中,前 LRR 块(N1)中的重复单元数大于后续块(N2);N1 » N2 中,个体家族同源物中的 N1 是可变的,而 N2 是高度保守的。除 RPK2 家族外,LRR-RLK 的五个家族均显示 N1 = 8-18 和 N2 = 3-5。LRR-RLP 的九个家族显示 N1 = 12-33 和 N2 = 4;而水稻 Os10g0479700 家族的 N1 = 6 和 N2 = 4,大豆蛋白家族的 N1 = 4-28 和 N2 = 4。N1 » N2 的规则可能在 LRR-RLKs 和 LRR-RLPs 的配体相互作用、二聚化和/或信号转导中发挥共同的重要作用。还讨论了具有非 LRR IR 的 LRR 结构域及其蛋白质的结构和进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf0d/4030839/844162c540cf/biomolecules-02-00288-g001.jpg

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