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单链DNA结合蛋白与吸附在单壁碳纳米管上的DNA分子的选择性结合。

Selective binding of single-stranded DNA-binding proteins onto DNA molecules adsorbed on single-walled carbon nanotubes.

作者信息

Nii Daisuke, Hayashida Takuya, Yamaguchi Yuuki, Ikawa Shukuko, Shibata Takehiko, Umemura Kazuo

机构信息

Biophysics Section, Department of Physics, Graduate School of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 1628601, Japan.

Cellular and Molecular Biology Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan; Graduate School of Nanobioscience, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.

出版信息

Colloids Surf B Biointerfaces. 2014 Sep 1;121:325-30. doi: 10.1016/j.colsurfb.2014.06.008. Epub 2014 Jun 10.

DOI:10.1016/j.colsurfb.2014.06.008
PMID:24974776
Abstract

Single-stranded DNA-binding (SSB) proteins were treated with hybrids of DNA and single-walled carbon nanotubes (SWNTs) to examine the biological function of the DNA molecules adsorbed on the SWNT surface. When single-stranded DNA (ssDNA) was used for the hybridization, significant binding of the SSB molecules to the ssDNA-SWNT hybrids was observed by using atomic force microscopy (AFM) and agarose gel electrophoresis. When double-stranded DNA (dsDNA) was used, the SSB molecules did not bind to the dsDNA-SWNT hybrids in most of the conditions that we evaluated. A specifically modified electrophoresis procedure was used to monitor the locations of the DNA, SSB, and SWNT molecules. Our results clearly showed that ssDNA/dsDNA molecules on the SWNT surfaces retained their single-stranded/double-stranded structures.

摘要

将单链DNA结合(SSB)蛋白与DNA和单壁碳纳米管(SWNT)的杂交体进行处理,以研究吸附在SWNT表面的DNA分子的生物学功能。当使用单链DNA(ssDNA)进行杂交时,通过原子力显微镜(AFM)和琼脂糖凝胶电泳观察到SSB分子与ssDNA-SWNT杂交体有显著结合。当使用双链DNA(dsDNA)时,在我们评估的大多数条件下,SSB分子不与dsDNA-SWNT杂交体结合。采用一种经过特殊改良的电泳程序来监测DNA、SSB和SWNT分子的位置。我们的结果清楚地表明,SWNT表面的ssDNA/dsDNA分子保留了它们的单链/双链结构。

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