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一项三阶段全基因组关联研究鉴定出 2q24.1 区域是放疗后晚期毒性易感性的新位点。

A three-stage genome-wide association study identifies a susceptibility locus for late radiotherapy toxicity at 2q24.1.

机构信息

1] Fundación Pública Galega de Medicina Xenómica, Servizo Galego de Saúde (SERGAS), Santiago de Compostela, Spain. [2] Grupo de Medicina Xenómica, Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Universidade de Santiago de Compostela (USC), Santiago de Compostela, Spain.

Department of Radiation Oncology, USC University Hospital Complex, SERGAS, Santiago de Compostela, Spain.

出版信息

Nat Genet. 2014 Aug;46(8):891-4. doi: 10.1038/ng.3020. Epub 2014 Jun 29.

Abstract

There is increasing evidence supporting the role of genetic variants in the development of radiation-induced toxicity. However, previous candidate gene association studies failed to elucidate the common genetic variation underlying this phenotype, which could emerge years after the completion of treatment. We performed a genome-wide association study on a Spanish cohort of 741 individuals with prostate cancer treated with external beam radiotherapy (EBRT). The replication cohorts consisted of 633 cases from the UK and 368 cases from North America. One locus comprising TANC1 (lowest unadjusted P value for overall late toxicity=6.85×10(-9), odds ratio (OR)=6.61, 95% confidence interval (CI)=2.23-19.63) was replicated in the second stage (lowest unadjusted P value for overall late toxicity=2.08×10(-4), OR=6.17, 95% CI=2.25-16.95; Pcombined=4.16×10(-10)). The inclusion of the third cohort gave unadjusted Pcombined=4.64×10(-11). These results, together with the role of TANC1 in regenerating damaged muscle, suggest that the TANC1 locus influences the development of late radiation-induced damage.

摘要

越来越多的证据支持遗传变异在放射性毒性发展中的作用。然而,之前的候选基因关联研究未能阐明这种表型背后的常见遗传变异,这种变异可能在治疗完成多年后才会出现。我们对 741 名接受外照射放射治疗(EBRT)的西班牙前列腺癌患者进行了全基因组关联研究。验证队列包括来自英国的 633 例病例和来自北美的 368 例病例。一个包含 TANC1 的基因座(总体晚期毒性的最低未调整 P 值=6.85×10(-9),比值比(OR)=6.61,95%置信区间(CI)=2.23-19.63)在第二阶段得到了复制(总体晚期毒性的最低未调整 P 值=2.08×10(-4),OR=6.17,95% CI=2.25-16.95;Pcombined=4.16×10(-10))。纳入第三个队列后,未调整的 Pcombined=4.64×10(-11)。这些结果,加上 TANC1 在再生受损肌肉中的作用,表明 TANC1 基因座影响晚期放射性损伤的发展。

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