Department of Biochemistry, Virginia Polytechnic Institute and State University , Blacksburg, Virginia 24061, United States.
Biochemistry. 2014 Jul 22;53(28):4635-47. doi: 10.1021/bi500615p. Epub 2014 Jul 10.
We have established the biosynthetic pathway and the associated genes for the biosynthesis of the 5-(aminomethyl)-3-furanmethanol (F1) moiety of methanofuran in the methanogenic archaeon Methanocaldococcus jannaschii. The recombinant enzyme, derived from the MJ1099 gene, was shown to readily condense glyceraldehyde 3-phosphate (Ga-3P) and dihydroxyacetone-P (DHAP) to form 4-(hydroxymethyl)-2-furancarboxaldehyde phosphate (4-HFC-P). The recombinant purified pyridoxal 5'-phosphate-dependent aminotransferase, derived from the MJ0684 gene, was found to be specific for catalyzing the transamination reaction between 4-HFC-P and [(15)N]alanine to produce [(15)N] 5-(aminomethyl)-3-furanmethanol-P (F1-P) and pyruvate. To confirm these results in cell extracts, we developed sensitive analytical methods for the liquid chromatography-ultraviolet-electrospray ionization mass spectrometry analysis of F1 as a 7-nitrobenzofurazan derivative. This method has allowed for the quantitation of trace amounts of F1 and F1-P in cell extracts and the measurement of the incorporation of stable isotopically labeled precursors into F1. After incubation of cell extracts with [1,2,3-(13)C3]pyruvate and DHAP, 4-([(2)H2]hydroxymethyl)-2-furancarboxylic acid phosphate (4-HFCA-P) or 4-([(2)H2]hydroxymethyl)-2-furancarboxaldehyde phosphate (4-HFC-P) was found to be incorporated into F1-P. 4-HFCA-P and 4-HFC-P were confirmed in cell extracts after removal of the phosphate. The low level of incorporation of [1,2,3-(13)C3]pyruvate into F1-P in these experiments is explained by the fact that the labeled pyruvate must first be converted into Ga-3-P through gluconeogenesis before being incorporated into 4-HFC-P. Cell extracts incubated with 4-HFC-P and a mixture of [(15)N]aspartate, [(15)N]glutamate, and [(15)N]alanine produced [(15)N]F1-P. We also demonstrated that aqueous solutions of methylglyoxal or pyruvate heated with dihydroxyacetone led to the formation of 4-HFC and 4-HFCA, suggesting a possible prebiotic route to this moiety of methanofuran.
我们已经在产甲烷古菌 Methanocaldococcus jannaschii 中建立了 5-(氨甲基)-3-呋喃甲醇 (F1) 部分的生物合成途径和相关基因。从 MJ1099 基因衍生的重组酶被证明可以轻易地将甘油醛 3-磷酸 (Ga-3P) 和二羟丙酮-P (DHAP) 缩合形成 4-(羟甲基)-2-呋喃甲醛磷酸 (4-HFC-P)。从 MJ0684 基因衍生的纯化的吡哆醛 5'-磷酸依赖性氨基转移酶被发现专门催化 4-HFC-P 与 [(15)N]丙氨酸之间的转氨反应,生成 [(15)N]5-(氨甲基)-3-呋喃甲醇-P (F1-P) 和丙酮酸。为了在细胞提取物中证实这些结果,我们开发了用于 F1 作为 7-硝基苯并呋咱衍生物的液相色谱-紫外-电喷雾电离质谱分析的灵敏分析方法。该方法允许定量检测细胞提取物中的痕量 F1 和 F1-P,并测量稳定同位素标记前体掺入 F1 中。在用 [1,2,3-(13)C3]丙酮酸和 DHAP 孵育细胞提取物后,发现 4-([(2)H2]羟甲基)-2-呋喃羧酸磷酸 (4-HFCA-P) 或 4-([(2)H2]羟甲基)-2-呋喃甲醛磷酸 (4-HFC-P) 被掺入 F1-P 中。在去除磷酸后,在细胞提取物中证实了 4-HFCA-P 和 4-HFC-P 的存在。在这些实验中,[1,2,3-(13)C3]丙酮酸掺入 F1-P 的水平很低,可以解释为标记的丙酮酸必须首先通过糖异生转化为 Ga-3-P,然后才能掺入 4-HFC-P。用 4-HFC-P 和 [(15)N]天冬氨酸、[(15)N]谷氨酸和 [(15)N]丙氨酸的混合物孵育的细胞提取物产生了 [(15)N]F1-P。我们还证明了在二羟丙酮存在下加热甲基乙二醛或丙酮酸会导致 4-HFC 和 4-HFCA 的形成,这表明了甲硫醇呋喃这一部分的可能的前生物途径。