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黑腹果蝇 mthl1 基因功能及信号转导的比较 RNA 测序分析。

Comparative RNA-sequencing analysis of mthl1 functions and signal transductions in Tribolium castaneum.

机构信息

Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China.

出版信息

Gene. 2014 Sep 1;547(2):310-8. doi: 10.1016/j.gene.2014.06.064. Epub 2014 Jun 30.

Abstract

Methuselah-like 1 of Tribolium castaneum (TcMthl1) has been reported to play crucial roles in development, lifespan, stress resistance and reproduction. However, the signaling system of TcMthl1 is unknown. Thus, we compare the transcriptome profile of RNAi treated larvae (ds-Tcmthl1) and control larvae of T. castaneum by RNA-sequencing, and obtained 14,613,514 sequence reads aligned with 13,533 genes; 812 differentially expressed genes (DEGs) were identified. These DEGs were classified into 47 GO functional groups, including such functions as the immune system process, the response to stimulus, the developmental process and reproduction. Interestingly, knock-down of Tcmthl1 suppressed both of Toll and IMD immunity pathways which most likely modulated the effects of Tcmthl1 on lifespan and stress resistance. Additionally, the DEGs encoding Blimp-1, Ftz-F1, E74 and Timeless may participate in the development and reproduction of ds-Tcmthl1 insects. The findings of these DEGs and pathways will provide valuable insight into TcMthl1 signaling and regulation system.

摘要

米苏耳拉样蛋白 1 已被报道在发育、寿命、抗逆性和生殖中发挥关键作用 Tribolium castaneum(TcMthl1)。然而,TcMthl1 的信号系统尚不清楚。因此,我们通过 RNA 测序比较了 RNAi 处理幼虫(ds-Tcmthl1)和 T. castaneum 对照幼虫的转录组图谱,获得了 14613514 条与 13533 个基因对齐的序列读段;鉴定出 812 个差异表达基因(DEGs)。这些 DEGs 被分为 47 个 GO 功能组,包括免疫系统过程、对刺激的反应、发育过程和生殖等功能。有趣的是,Tcmthl1 的敲低抑制了 Toll 和 IMD 免疫途径,这很可能调节了 Tcmthl1 对寿命和抗逆性的影响。此外,编码 Blimp-1、Ftz-F1、E74 和 Timeless 的 DEGs 可能参与 ds-Tcmthl1 昆虫的发育和生殖。这些 DEGs 和途径的发现将为 TcMthl1 的信号转导和调控系统提供有价值的见解。

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