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在两个中国特雷彻·柯林斯综合征病例中发现 TCOF1 基因的一个新的沉默缺失、一个插入突变和一个无义突变。

A novel silent deletion, an insertion mutation and a nonsense mutation in the TCOF1 gene found in two Chinese cases of Treacher Collins syndrome.

机构信息

BaYi Children's Hospital of the General Military Hospital of Beijing PLA, 5 Nanmencang Road, Dongcheng District, Beijing, 100700, People's Republic of China,

出版信息

Mol Genet Genomics. 2014 Dec;289(6):1237-40. doi: 10.1007/s00438-014-0883-8. Epub 2014 Jul 4.

DOI:10.1007/s00438-014-0883-8
PMID:24994558
Abstract

Treacher Collins syndrome (TCS) is the most common and well-known craniofacial disorder caused by mutations in the genes involved in pre-rRNA transcription, which include the TCOF1 gene. This study explored the role of TCOF1 mutations in Chinese patients with TCS. Mutational analysis of the TCOF1 gene was performed in three patients using polymerase chain reaction and direct sequencing. Among these three patients, two additional TCOF1 variations, a novel 18 bp deletion and a novel 1 bp insertion mutation, were found in patient 1, together with a novel nonsense mutation (p.Ser476X) and a previously reported 4 bp deletion (c.1872_1875delTGAG) in other patients. Pedigree analysis allowed for prediction of the character of the mutation, which was either pathological or not. The 18 bp deletion of six amino acids, Ser-Asp-Ser-Glu-Glu-Glu (798*803), which was located in the CKII phosphorylation site of treacle, seemed relatively benign for TCS. By contrast, another novel mutation of c.1072_1073insC (p.Gln358ProfsX23) was a frameshift mutation and expected to result in a premature stop codon. This study provides insights into the functional domain of treacle and illustrates the importance of clinical and family TCS screening for the interpretation of novel sequence alterations.

摘要

特雷彻·柯林斯综合征(TCS)是最常见和广为人知的颅面畸形疾病,由涉及前 rRNA 转录的基因突变引起,其中包括 TCOF1 基因。本研究探讨了 TCOF1 基因突变在 TCS 中国患者中的作用。通过聚合酶链反应和直接测序对三名患者的 TCOF1 基因进行了突变分析。在这三名患者中,在患者 1 中发现了另外两个 TCOF1 变异,一个新的 18 bp 缺失和一个新的 1 bp 插入突变,以及其他患者中之前报道的一个新的无义突变(p.Ser476X)和 4 bp 缺失(c.1872_1875delTGAG)。家系分析允许预测突变的特征,无论是病理性的还是非病理性的。位于 treacle 的 CKII 磷酸化位点的六个氨基酸 Ser-Asp-Ser-Glu-Glu-Glu(798*803)的 18 bp 缺失似乎对 TCS 相对良性。相比之下,另一个新的 c.1072_1073insC(p.Gln358ProfsX23)突变是移码突变,预计会导致提前终止密码子。本研究深入了解了 treacle 的功能域,并说明了对新序列改变进行临床和家族 TCS 筛查的重要性。

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本文引用的文献

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[Clinical and genetic analysis of a patient with Treacher Collins syndrome in TCOF1 gene].[1例TCOF1基因特雷彻·柯林斯综合征患者的临床与遗传学分析]
Lin Chuang Er Bi Yan Hou Tou Jing Wai Ke Za Zhi. 2012 May;26(10):459-62.
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Novel mutations of TCOF1 gene in European patients with Treacher Collins syndrome.TCOF1 基因在欧洲特雷彻·柯林斯综合征患者中的新突变。
BMC Med Genet. 2011 Sep 27;12:125. doi: 10.1186/1471-2350-12-125.
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Exploring the genetic origins of Treacher Collins syndrome.探索特雷彻·柯林斯综合征的遗传起源。
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Identification of a novel gross deletion of TCOF1 in a Chinese prenatal case with Treacher Collins syndrome.鉴定一名中国产前特雷彻·柯林斯综合征患者 TCOF1 基因的新型大片段缺失。
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TCOF1 pathogenic variants identified by Whole-exome sequencing in Chinese Treacher Collins syndrome families and hearing rehabilitation effect.全外显子测序在中国特雷彻·柯林斯综合征家系中鉴定的 TCOF1 致病性变异体及听力康复效果。
Orphanet J Rare Dis. 2019 Jul 15;14(1):178. doi: 10.1186/s13023-019-1136-z.
6
Mutation screening of Chinese Treacher Collins syndrome patients identified novel TCOF1 mutations.对中国特雷彻·柯林斯综合征患者进行的突变筛查发现了新的TCOF1突变。
Mol Genet Genomics. 2018 Apr;293(2):569-577. doi: 10.1007/s00438-017-1384-3. Epub 2017 Dec 11.
Clin Genet. 2011 Apr;79(4):330-2. doi: 10.1111/j.1399-0004.2011.01632.x. Epub 2011 Feb 7.
4
Mutations in genes encoding subunits of RNA polymerases I and III cause Treacher Collins syndrome.编码 RNA 聚合酶 I 和 III 亚基的基因突变会导致特雷彻·柯林斯综合征。
Nat Genet. 2011 Jan;43(1):20-2. doi: 10.1038/ng.724. Epub 2010 Dec 5.
5
Reduced transcription of TCOF1 in adult cells of Treacher Collins syndrome patients.特雷彻·柯林斯综合征患者成体细胞中 TCOF1 的转录减少。
BMC Med Genet. 2009 Dec 14;10:136. doi: 10.1186/1471-2350-10-136.
6
Detection of a novel silent deletion, a missense mutation and a nonsense mutation in TCOF1.TCOF1基因中一个新型沉默缺失、一个错义突变和一个无义突变的检测。
Pediatr Int. 2008 Dec;50(6):806-9. doi: 10.1111/j.1442-200X.2008.02650.x.
7
Tcof1/Treacle is required for neural crest cell formation and proliferation deficiencies that cause craniofacial abnormalities.Tcof1/Treacle是神经嵴细胞形成和增殖所必需的,其缺陷会导致颅面异常。
Proc Natl Acad Sci U S A. 2006 Sep 5;103(36):13403-8. doi: 10.1073/pnas.0603730103. Epub 2006 Aug 28.
8
The Treacher Collins syndrome (TCOF1) gene product is involved in ribosomal DNA gene transcription by interacting with upstream binding factor.特雷彻·柯林斯综合征(TCOF1)基因产物通过与上游结合因子相互作用参与核糖体DNA基因转录。
Proc Natl Acad Sci U S A. 2004 Jul 20;101(29):10709-14. doi: 10.1073/pnas.0402492101. Epub 2004 Jul 12.
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Parental origin of mutations in sporadic cases of Treacher Collins syndrome.特雷彻·柯林斯综合征散发病例中突变的亲本来源
Eur J Hum Genet. 2003 Sep;11(9):718-22. doi: 10.1038/sj.ejhg.5201029.
10
Screening of TCOF1 in patients from different populations: confirmation of mutational hot spots and identification of a novel missense mutation that suggests an important functional domain in the protein treacle.不同人群患者中TCOF1的筛查:突变热点的确认以及一种新错义突变的鉴定,该突变提示了treacle蛋白中的一个重要功能域。
J Med Genet. 2002 Jul;39(7):493-5. doi: 10.1136/jmg.39.7.493.