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[极端生态系统细菌的系统发育分析]

[Phylogenetic analysis of bacteria of extreme ecosystems].

作者信息

Romanovskaia V A, Parfenova V V, Bel'kova N L, Sukhanova E V, Gladka G V, Tashireva A A

出版信息

Mikrobiol Z. 2014 May-Jun;76(3):2-10.

Abstract

Phylogenetic analysis of aerobic chemoorganotrophic bacteria of the two extreme regions (Dead Sea and West Antarctic) was performed on the basis of the nucleotide sequences of the 16S rRNA gene. Thermotolerant and halotolerant spore-forming bacteria 7t1 and 7t3 of terrestrial ecosystems Dead Sea identified as Bacillus licheniformis and B. subtilis subsp. subtilis, respectively. Taking into account remote location of thermotolerant strain 6t1 from closely related strains in the cluster Staphylococcus, 6t1 strain can be regarded as Staphylococcus sp. In terrestrial ecosystems, Galindez Island (Antarctic) detected taxonomically diverse psychrotolerant bacteria. From ornithogenic soil were isolated Micrococcus luteus O-1 and Microbacterium trichothecenolyticum O-3. Strains 4r5, 5r5 and 40r5, isolated from grass and lichens, can be referred to the genus Frondihabitans. These strains are taxonomically and ecologically isolated and on the tree diagram form the joint cluster with three isolates Frondihabitans sp., isolated from the lichen Austrian Alps, and psychrotolerant associated with plants F. cladoniiphilus CafT13(T). Isolates from black lichen in the different stationary observation points on the south side of a vertical cliff identified as: Rhodococcus fascians 181n3, Sporosarcina aquimarina O-7, Staphylococcus sp. 0-10. From orange biofilm of fouling on top of the vertical cliff isolated Arthrobacter sp. 28r5g1, from the moss-- Serratia sp. 6r1g. According to the results, Frondihabitans strains most frequently encountered among chemoorganotrophic aerobic bacteria in the Antarctic phytocenoses.

摘要

基于16S rRNA基因的核苷酸序列,对两个极端区域(死海和南极西部)的需氧化学有机营养细菌进行了系统发育分析。在死海陆地生态系统中鉴定出的耐热和耐盐芽孢杆菌7t1和7t3分别为地衣芽孢杆菌和枯草芽孢杆菌枯草亚种。考虑到耐热菌株6t1与葡萄球菌属聚类中密切相关菌株的距离较远,6t1菌株可被视为葡萄球菌属。在陆地生态系统中,加林德斯岛(南极)检测到分类多样的耐冷细菌。从鸟粪土中分离出了藤黄微球菌O-1和解木素镰刀菌微杆菌O-3。从草和地衣中分离出的菌株4r5、5r5和40r5可归为叶栖菌属。这些菌株在分类学和生态学上是孤立的,在树形图上与从奥地利阿尔卑斯山地衣中分离出的三个叶栖菌属菌株以及与植物相关的耐冷菌F. cladoniiphilus CafT13(T)形成联合聚类。从垂直悬崖南侧不同固定观测点的黑地衣中分离出的菌株鉴定为:筋膜红球菌181n3、海生水芽孢杆菌O-7、葡萄球菌属0-10。从垂直悬崖顶部的橙色污垢生物膜中分离出节杆菌属28r5g1,从苔藓中分离出沙雷氏菌属6r1g。根据结果,叶栖菌属菌株在南极植物群落的需氧化学有机营养细菌中最常出现。

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