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新种海产芽孢杆菌,从海洋沉积物中分离得到。

Bacillus aequororis sp. nov., isolated from marine sediment.

作者信息

Singh Nitin Kumar, Kaur Chandandeep, Kumar Narender, Velmurugan Subramanian, Citarasu Thavasimuthu, Mayilraj Shanmugam

机构信息

MTCC- Microbial Type Culture Collection and Gene Bank, Chandigarh, 160 036, India.

出版信息

Curr Microbiol. 2014 Nov;69(5):758-62. doi: 10.1007/s00284-014-0654-0. Epub 2014 Jul 10.

Abstract

The taxonomic position of a bacterium isolated from a marine sediment sample collected from the Bay of Bengal, Kanyakumari coast, India, was analyzed by using a polyphasic taxonomic approach. The isolated strain, designated as M-8(T), had phenotypic characteristics that matched those of the genus Bacillus and it represents a novel species. The diagnostic cell wall amino acid is meso-DAP. The major menaquinone is MK-7, and the strain has a phospholipid pattern of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and unknown glycolipid. The almost-complete 16S rRNA gene sequence (1,450 bases) of the novel strain was compared with those of closely related species and confirmed that the strain belongs to the genus Bacillus. 16S rRNA gene sequence analysis revealed that strain M-8(T) differs from the closely related species Bacillus horikoshi 99.5 %, Bacillus halmapalus 98.3 %, and Bacillus cohni 97.4 %. However, the DNA-DNA hybridization showed that it had genomic relatedness value of 60.7 % with B. horikoshi, B. halmapalus (37.6 %), and B. cohnii (29.9 %). The DNA G+C content of strain M-8(T) is 40.6 mol%. Based on the polyphasic data, strain M-8(T) should be recognized as a novel species of the genus Bacillus, for which the name Bacillus aequororis sp. nov. is proposed. The type strain is M-8(T) (=MTCC 11626(T) = JCM 19304(T)).

摘要

采用多相分类学方法分析了从印度卡尼亚库马里海岸孟加拉湾采集的海洋沉积物样本中分离出的一株细菌的分类地位。分离出的菌株命名为M-8(T),其表型特征与芽孢杆菌属相符,代表一个新物种。诊断性细胞壁氨基酸为内消旋二氨基庚二酸。主要甲基萘醌为MK-7,该菌株的磷脂模式为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺和未知糖脂。将该新菌株几乎完整的16S rRNA基因序列(1450个碱基)与密切相关物种的序列进行比较,证实该菌株属于芽孢杆菌属。16S rRNA基因序列分析表明,菌株M-8(T)与密切相关物种嗜盐芽孢杆菌的差异为99.5%,与盐沼芽孢杆菌的差异为98.3%,与科氏芽孢杆菌的差异为97.4%。然而,DNA-DNA杂交显示,它与嗜盐芽孢杆菌的基因组相关性值为60.7%,与盐沼芽孢杆菌为37.6%,与科氏芽孢杆菌为29.9%。菌株M-8(T)的DNA G+C含量为40.6 mol%。基于多相数据,菌株M-8(T)应被认定为芽孢杆菌属的一个新物种,为此提出新名称嗜海芽孢杆菌(Bacillus aequororis sp. nov.)。模式菌株为M-8(T)(=MTCC 11626(T)=JCM 19304(T))。

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