Key Laboratory of Marine Bio-resources Sustainable Utilization CAS, RNAM Center for Marine Microbiology, Guangdong Key Laboratory of Marine Materia Medica, South China Sea Institute of Oceanology, Chinese Academy of Sciences, 164 West Xingang Road, Guangzhou, 510301, People's Republic of China.
Antonie Van Leeuwenhoek. 2013 May;103(5):963-9. doi: 10.1007/s10482-013-9875-7. Epub 2013 Jan 12.
A Gram-positive bacterium, designated SCSIO 15042(T), was isolated from a sediment of the South China Sea and was subjected to a polyphasic taxonomic study. The isolate grew at 20-60 °C, pH 6.0-10.0 and it could grow with up to 10 % (w/v) NaCl. The cell-wall diamino acid was found to be meso-diaminopimelic acid. Polar lipids were found to be diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine and an unknown polar lipid. The only menaquinone was determined to be MK-7. The major fatty acids were identified as C16:1 ω7c/C16:1 ω6c, C16:0, iso-C15:0, anteiso-C15:0, and iso-C16:0. The DNA G+C content of strain SCSIO 15042(T) was determined to be 43.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences affiliated strain SCSIO 15042(T) to the genus Bacillus. Levels of 16S rRNA gene sequence similarities between strain SCSIO 15042(T) and Bacillus herbersteinensis D-1-5a(T), Bacillus infantis SMC 4352-1(T), Bacillus novalis LMG 21837(T) and Bacillus drentensis LMG 21831(T) were 96.2, 96.2, 96.1 and 96.1 %, respectively. Based on the evidence of the present polyphasic study, strain SCSIO 15042(T) is considered to represent a novel species of the genus Bacillus, for which the name Bacillus abyssalis sp. nov. is proposed. The type strain is SCSIO 15042(T) (=DSM 25875(T) = CCTCC AB 2012074(T) = NBRC 109102(T)).
一株革兰氏阳性细菌,命名为 SCSIO 15042(T),从南海沉积物中分离得到,并进行了多相分类学研究。该分离株在 20-60°C、pH 值 6.0-10.0 和高达 10%(w/v)NaCl 的条件下生长。细胞壁二氨基庚二酸被鉴定为 meso-二氨基庚二酸。极性脂类被鉴定为双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺以及一种未知的极性脂类。唯一的menaquinone 被确定为 MK-7。主要脂肪酸鉴定为 C16:1 ω7c/C16:1 ω6c、C16:0、iso-C15:0、anteiso-C15:0 和 iso-C16:0。菌株 SCSIO 15042(T) 的 DNA G+C 含量为 43.1 mol%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 SCSIO 15042(T) 属于芽孢杆菌属。菌株 SCSIO 15042(T) 与 Bacillus herbersteinensis D-1-5a(T)、Bacillus infantis SMC 4352-1(T)、Bacillus novalis LMG 21837(T) 和 Bacillus drentensis LMG 21831(T) 的 16S rRNA 基因序列相似性水平分别为 96.2%、96.2%、96.1%和 96.1%。基于多相研究的证据,菌株 SCSIO 15042(T) 被认为代表芽孢杆菌属的一个新种,命名为深渊芽孢杆菌(Bacillus abyssalis)。模式菌株为 SCSIO 15042(T) (=DSM 25875(T) = CCTCC AB 2012074(T) = NBRC 109102(T))。