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成年大鼠与胚胎第14天大鼠肝脏基因表达谱的微阵列比较。

Microarray comparison of the gene expression profiles in the adult vs. embryonic day 14 rat liver.

作者信息

Zheng Jie, Yu Shuna, Jiang Zhengchen, Shi Caixing, Li Jin, DU Xiaodong, Wang Hailiang, Jiang Jiying

机构信息

Department of Pathology, Weifang Medical University, Weifang, Shandong 261053, P.R. China.

Department of Anatomy, Weifang Medical University, Weifang, Shandong 261053, P.R. China.

出版信息

Biomed Rep. 2014 Sep;2(5):664-670. doi: 10.3892/br.2014.303. Epub 2014 Jun 25.

Abstract

The aim of the present study was to identify the differentially-expressed genes of embryonic day 14 (ED 14) rat liver in comparison to adult rat liver, which may provide specific information for the investigation of the hepatogenesis mechanism. The gene expression profiles of ED 14 and adult rat livers were investigated using microarray analysis (the Illumina RatRef-12 Expression BeadChip). Quantitative polymerase chain reaction (qPCR) analyses were conducted to confirm the gene expression. There were 787 genes upregulated in the embryonic liver. Based on the gene ontology classification system, which was analyzed by the database for annotation, visualization and integrated discovery software, a number of the upregulated genes were categorized into the distinct and differentially-expressed functional groups, including metabolism pathway, cell cycle, transcription, signal transduction, purine metabolism, cell structure, transportation and apoptosis. qPCR analyses confirmed the gene expression. Eleven upregulated genes were found in the ED 14 rat liver, which may provide specific information for the understanding of the molecular mechanisms that control hepatogenesis. These overexpressed genes are potential markers for identifying hepatic progenitor cells.

摘要

本研究的目的是鉴定胚胎第14天(ED 14)大鼠肝脏与成年大鼠肝脏中差异表达的基因,这可能为肝发生机制的研究提供特定信息。使用微阵列分析(Illumina RatRef-12表达微珠芯片)研究了ED 14和成年大鼠肝脏的基因表达谱。进行了定量聚合酶链反应(qPCR)分析以确认基因表达。胚胎肝脏中有787个基因上调。基于通过注释、可视化和综合发现软件数据库分析的基因本体分类系统,许多上调基因被分类到不同的差异表达功能组中,包括代谢途径、细胞周期、转录、信号转导、嘌呤代谢、细胞结构、运输和凋亡。qPCR分析证实了基因表达。在ED 14大鼠肝脏中发现了11个上调基因,这可能为理解控制肝发生的分子机制提供特定信息。这些过表达基因是鉴定肝祖细胞的潜在标志物。

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