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南极地衣中的藻类和真菌多样性。

Algal and fungal diversity in Antarctic lichens.

作者信息

Park Chae Haeng, Kim Kyung Mo, Elvebakk Arve, Kim Ok-Sun, Jeong Gajin, Hong Soon Gyu

机构信息

Division of Polar Life Sciences, Korea Polar Research Institute, 26 Songdomirae-ro, Yeonsu-gu, Incheon, 406-840, Korea; School of Biological Sciences, College of Natural Science, Seoul National University, 599 Gwanak-ro, Gwanak-gu, Seoul, Korea.

出版信息

J Eukaryot Microbiol. 2015 Mar-Apr;62(2):196-205. doi: 10.1111/jeu.12159. Epub 2014 Sep 3.

DOI:10.1111/jeu.12159
PMID:25105247
Abstract

The composition of lichen ecosystems except mycobiont and photobiont has not been evaluated intensively. In addition, recent studies to identify algal genotypes have raised questions about the specific relationship between mycobiont and photobiont. In the current study, we analyzed algal and fungal community structures in lichen species from King George Island, Antarctica, by pyrosequencing of eukaryotic large subunit (LSU) and algal internal transcribed spacer (ITS) domains of the nuclear rRNA gene. The sequencing results of LSU and ITS regions indicated that each lichen thallus contained diverse algal species. The major algal operational taxonomic unit (OTU) defined at a 99% similarity cutoff of LSU sequences accounted for 78.7-100% of the total algal community in each sample. In several cases, the major OTUs defined by LSU sequences were represented by two closely related OTUs defined by 98% sequence similarity of ITS domain. The results of LSU sequences indicated that lichen-associated fungi belonged to the Arthoniomycetes, Eurotiomycetes, Lecanoromycetes, Leotiomycetes, and Sordariomycetes of the Ascomycota, and Tremellomycetes and Cystobasidiomycetes of the Basidiomycota. The composition of major photobiont species and lichen-associated fungal community were mostly related to the mycobiont species. The contribution of growth forms or substrates on composition of photobiont and lichen-associated fungi was not evident.

摘要

除了地衣共生菌和光合生物外,地衣生态系统的组成尚未得到深入评估。此外,最近鉴定藻类基因型的研究对共生菌与光合生物之间的特定关系提出了疑问。在本研究中,我们通过对核rRNA基因的真核大亚基(LSU)和藻类内转录间隔区(ITS)进行焦磷酸测序,分析了南极乔治王岛地衣物种中的藻类和真菌群落结构。LSU和ITS区域的测序结果表明,每个地衣叶状体都包含多种藻类物种。在LSU序列99%相似性阈值下定义的主要藻类操作分类单元(OTU)占每个样本藻类群落总数的78.7-100%。在几种情况下,由LSU序列定义的主要OTU由ITS区域98%序列相似性定义的两个密切相关的OTU代表。LSU序列的结果表明,与地衣相关的真菌属于子囊菌门的节担菌纲、散囊菌纲、茶渍纲、柔膜菌纲和粪壳菌纲,以及担子菌门的银耳纲和隔担菌纲。主要光合生物物种和与地衣相关的真菌群落组成大多与共生菌物种有关。生长形式或基质对光合生物和与地衣相关真菌组成的贡献不明显。

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