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欧洲鳀鱼的热适应性与渐变型线粒体DNA变异

Thermal adaptation and clinal mitochondrial DNA variation of European anchovy.

作者信息

Silva Gonçalo, Lima Fernando P, Martel Paulo, Castilho Rita

机构信息

Centro de Ciências do Mar (CCMAR), Universidade do Algarve, Campus de Gambelas, Faro 8005-139, Portugal.

CIBIO, Research Center in Biodiversity and Genetic Resources, University of Porto, Campus Agrário de Vairão, Vairão 4485-661, Portugal.

出版信息

Proc Biol Sci. 2014 Oct 7;281(1792). doi: 10.1098/rspb.2014.1093.

Abstract

Natural populations of widely distributed organisms often exhibit genetic clinal variation over their geographical ranges. The European anchovy, Engraulis encrasicolus, illustrates this by displaying a two-clade mitochondrial structure clinally arranged along the eastern Atlantic. One clade has low frequencies at higher latitudes, whereas the other has an anti-tropical distribution, with frequencies decreasing towards the tropics. The distribution pattern of these clades has been explained as a consequence of secondary contact after an ancient geographical isolation. However, it is not unlikely that selection acts on mitochondria whose genes are involved in relevant oxidative phosphorylation processes. In this study, we performed selection tests on a fragment of 1044 bp of the mitochondrial cytochrome b gene using 455 individuals from 18 locations. We also tested correlations of six environmental features: temperature, salinity, apparent oxygen utilization and nutrient concentrations of phosphate, nitrate and silicate, on a compilation of mitochondrial clade frequencies from 66 sampling sites comprising 2776 specimens from previously published studies. Positive selection in a single codon was detected predominantly (99%) in the anti-tropical clade and temperature was the most relevant environmental predictor, contributing with 59% of the variance in the geographical distribution of clade frequencies. These findings strongly suggest that temperature is shaping the contemporary distribution of mitochondrial DNA clade frequencies in the European anchovy.

摘要

广泛分布的生物的自然种群在其地理分布范围内常常呈现出遗传渐变群变异。欧洲鳀鱼(Engraulis encrasicolus)在东大西洋沿岸呈现出一个由两个分支组成的线粒体结构渐变群,就说明了这一点。一个分支在较高纬度地区频率较低,而另一个分支具有反热带分布,其频率向热带地区递减。这些分支的分布模式被解释为古代地理隔离后二次接触的结果。然而,选择作用于其基因参与相关氧化磷酸化过程的线粒体并非不可能。在本研究中,我们使用来自18个地点的455个个体,对线粒体细胞色素b基因的1044 bp片段进行了选择测试。我们还测试了六个环境特征的相关性:温度、盐度、表观氧利用率以及磷酸盐、硝酸盐和硅酸盐的营养浓度,这些数据来自于先前发表研究中的66个采样地点的线粒体分支频率汇总,共包括2776个样本。在一个密码子中检测到的正选择主要(99%)出现在反热带分支中,温度是最相关的环境预测因子,其对分支频率地理分布方差的贡献率为59%。这些发现有力地表明,温度正在塑造欧洲鳀鱼线粒体DNA分支频率的当代分布。

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